RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 ZSCAN31Q96LW9 406 aaPredicted RBP15.85■□□□□ 0.13
VMP1-210ENST00000589823 P2RX7Q99572 595 aaKnown RBP15.85■□□□□ 0.13
VMP1-210ENST00000589823 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 UBA5Q9GZZ9 404 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 PPP1R9AQ9ULJ8 1098 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 HPS5Q9UPZ3 1129 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 THSD7BQ9C0I4 1608 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 MYPNQ86TC9 1320 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 NID2Q14112 1375 aa15.85■□□□□ 0.13
VMP1-210ENST00000589823 DHX16O60231 1041 aaKnown RBP15.84■□□□□ 0.13
VMP1-210ENST00000589823 CYP2C8P10632 490 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 SLC16A2P36021 539 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 HERVK_113P62684 666 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 SYDE2Q5VT97 1194 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
VMP1-210ENST00000589823 BTNL9Q6UXG8 535 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 ZFYVE28Q9HCC9 887 aa15.84■□□□□ 0.13
VMP1-210ENST00000589823 SH2B1Q9NRF2 756 aaPredicted RBP15.84■□□□□ 0.13
VMP1-210ENST00000589823 SPDYE16A6NNV3 312 aaPredicted RBP15.83■□□□□ 0.12
VMP1-210ENST00000589823 CPLX1O14810 134 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 CA12O43570 354 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 PFKFB2O60825 505 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 ZBED4O75132 1171 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 FDX1P10109 184 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 CDC27P30260 824 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 ME3Q16798 604 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 ATG4CQ96DT6 458 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 BEGAINQ9BUH8 593 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 PRR12Q9ULL5 1215 aa15.83■□□□□ 0.12
VMP1-210ENST00000589823 PLEKHA8P1O95397 391 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 CD2BP2O95400 341 aaKnown RBP15.82■□□□□ 0.12
VMP1-210ENST00000589823 LARGE1O95461 756 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 SMARCA1P28370 1054 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 ADD1P35611 737 aaKnown RBP15.82■□□□□ 0.12
VMP1-210ENST00000589823 GCLCP48506 637 aaPredicted RBP15.82■□□□□ 0.12
VMP1-210ENST00000589823 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 ADGRF4Q8IZF3 695 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 MB21D1Q8N884 522 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 SPZ1Q9BXG8 430 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 CPVLQ9H3G5 476 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 NCOA5Q9HCD5 579 aaKnown RBP15.82■□□□□ 0.12
VMP1-210ENST00000589823 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
VMP1-210ENST00000589823 FAM217BQ9NTX9 383 aaPredicted RBP15.82■□□□□ 0.12
VMP1-210ENST00000589823 VWA5AO00534 786 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 TRPA1O75762 1119 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 SCRN1Q12765 414 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 CRHR2Q13324 411 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
VMP1-210ENST00000589823 CCDC82Q8N4S0 544 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 SRBD1Q8N5C6 995 aaKnown RBP15.81■□□□□ 0.12
VMP1-210ENST00000589823 NECAB1Q8N987 351 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 PAGR1Q9BTK6 254 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 RNF186Q9NXI6 227 aa15.81■□□□□ 0.12
VMP1-210ENST00000589823 TLR2O60603 784 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 CDKL5O76039 1030 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 HSCBQ8IWL3 235 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 GTF3C6Q969F1 213 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 SNX21Q969T3 373 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 RRP36Q96EU6 259 aaKnown RBP15.8■□□□□ 0.12
VMP1-210ENST00000589823 RANBP17Q9H2T7 1088 aaKnown RBP15.8■□□□□ 0.12
VMP1-210ENST00000589823 JMJD4Q9H9V9 463 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 SLC38A10Q9HBR0 1119 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 SAGE1Q9NXZ1 904 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 SEC63Q9UGP8 760 aaKnown RBP15.8■□□□□ 0.12
VMP1-210ENST00000589823 ADAMTS5Q9UNA0 930 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 RABGAP1Q9Y3P9 1069 aa15.8■□□□□ 0.12
VMP1-210ENST00000589823 CYTH3O43739 400 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 TBC1D8O95759 1140 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 IFNAR1P17181 557 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 SNAP25P60880 206 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
VMP1-210ENST00000589823 PLS1Q14651 629 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 CDC37Q16543 378 aaPredicted RBP15.79■□□□□ 0.12
VMP1-210ENST00000589823 CCDC174Q6PII3 467 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 HOMER1Q86YM7 354 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 CCDC83Q8IWF9 413 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 ANKRD13CQ8N6S4 541 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 PIBF1Q8WXW3 757 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 TMX3Q96JJ7 454 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 RBPJLQ9UBG7 517 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 CPA4Q9UI42 421 aa15.79■□□□□ 0.12
VMP1-210ENST00000589823 CNTNAP5Q8WYK1 1306 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 K7ELQ4 463 aaPredicted RBP15.78■□□□□ 0.12
VMP1-210ENST00000589823 ZBTB5O15062 677 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 OAZ1P54368 228 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
VMP1-210ENST00000589823 TRIM22Q8IYM9 498 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 CPXCR1Q8N123 301 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 GPRC5AQ8NFJ5 357 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 PIGSQ96S52 555 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 RAVER2Q9HCJ3 691 aaKnown RBP15.78■□□□□ 0.12
VMP1-210ENST00000589823 BTBD7Q9P203 1132 aa15.78■□□□□ 0.12
VMP1-210ENST00000589823 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
VMP1-210ENST00000589823 MORF4L1Q9UBU8 362 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms