RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-225ENST00000589710 SHC4Q6S5L8 630 aa23.31■■□□□ 1.32
CIRBP-225ENST00000589710 SASS6Q6UVJ0 657 aa23.31■■□□□ 1.32
CIRBP-225ENST00000589710 KCTD1Q719H9 257 aa23.31■■□□□ 1.32
CIRBP-225ENST00000589710 CCDC12Q8WUD4 166 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-225ENST00000589710 RIOX1Q9H6W3 641 aa23.31■■□□□ 1.32
CIRBP-225ENST00000589710 GPATCH4Q5T3I0 446 aaKnown RBP23.3■■□□□ 1.32
CIRBP-225ENST00000589710 RPS12P25398 132 aaKnown RBP23.29■■□□□ 1.32
CIRBP-225ENST00000589710 GMPSP49915 693 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-225ENST00000589710 RRP1BQ14684 758 aaKnown RBP23.29■■□□□ 1.32
CIRBP-225ENST00000589710 ZNF174Q15697 407 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 FKBP1CQ5VVH2 108 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 TTBK2Q6IQ55 1244 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 CDAN1Q8IWY9 1227 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 ZBED3Q96IU2 234 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-225ENST00000589710 SDF4Q9BRK5 362 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 FBXO2Q9UK22 296 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-225ENST00000589710 CCDC194A0A1B0GVG4 234 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 WNT7AO00755 349 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 SLC16A2P36021 539 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 JAG1P78504 1218 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 RESP18Q5W5W9 173 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 GALNT17Q6IS24 598 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 MRVI1Q9Y6F6 885 aa23.29■■□□□ 1.32
CIRBP-225ENST00000589710 ZNF202O95125 648 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 SLC1A4P43007 532 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 SYKP43405 635 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 SPECC1Q5M775 1068 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 SLFN13Q68D06 897 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 MICALL2Q8IY33 904 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 ADGRF4Q8IZF3 695 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 DAGLBQ8NCG7 672 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 PCDHA6Q9UN73 950 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 SCAF8Q9UPN6 1271 aaKnown RBP23.28■■□□□ 1.32
CIRBP-225ENST00000589710 PCDHA8Q9Y5H6 950 aa23.28■■□□□ 1.32
CIRBP-225ENST00000589710 PTPREP23469 700 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 GRIN1Q05586 938 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 FAM83AQ86UY5 434 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 DCAF4Q8WV16 495 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 MKL1Q969V6 931 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 C6orf50Q9HD87 102 aa23.27■■□□□ 1.32
CIRBP-225ENST00000589710 SMCO2A6NFE2 343 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 BMP15O95972 392 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 EGFRP00533 1210 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 TRAPPC10P48553 1259 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 ZNF280AP59817 542 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-225ENST00000589710 MIGA2Q7L4E1 593 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 SIAH1Q8IUQ4 282 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 FAM177A1Q8N128 213 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-225ENST00000589710 TNNI2P48788 182 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 ZMYND12Q9H0C1 365 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 JMJD4Q9H9V9 463 aa23.26■■□□□ 1.31
CIRBP-225ENST00000589710 SRPRBQ9Y5M8 271 aaKnown RBP23.26■■□□□ 1.31
CIRBP-225ENST00000589710 hCG_1984214I3L0E3 225 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 GNA11P29992 359 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 MCM7P33993 719 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-225ENST00000589710 ANO6Q4KMQ2 910 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 GPC2Q8N158 579 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 ZNF713Q8N859 430 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-225ENST00000589710 ERCC4Q92889 916 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-225ENST00000589710 COA7Q96BR5 231 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 FAM13BQ9NYF5 915 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 HPSEQ9Y251 543 aa23.25■■□□□ 1.31
CIRBP-225ENST00000589710 USP17L10C9JJH3 530 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 M0R2N6 131 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 SAMD7Q7Z3H4 446 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 KCNH3Q9ULD8 1083 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 PNMA6FA0A0J9YX94 578 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 MMP14P50281 582 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 CCDC173Q0VFZ6 552 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 CSRNP2Q9H175 543 aa23.24■■□□□ 1.31
CIRBP-225ENST00000589710 CNOT7Q9UIV1 285 aaKnown RBP23.24■■□□□ 1.31
CIRBP-225ENST00000589710 F5H6K3 240 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 NDUFB10O96000 172 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 KLRC3Q07444 240 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 IKQ13123 557 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-225ENST00000589710 PTGDRQ13258 359 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 RASA3Q14644 834 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 INF2Q27J81 1249 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 GMCL1P1Q8NEA9 526 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 NUP88Q99567 741 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-225ENST00000589710 ZBTB21Q9ULJ3 1066 aa23.23■■□□□ 1.31
CIRBP-225ENST00000589710 TNFAIP1Q13829 316 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 ZNF579Q8NAF0 562 aaKnown RBP23.22■■□□□ 1.31
CIRBP-225ENST00000589710 DPF2Q92785 391 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 ARHGEF10LQ9HCE6 1279 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 FAM237AA0A1B0GTK4 181 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-225ENST00000589710 ADCY7P51828 1080 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 ATP2C1P98194 919 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-225ENST00000589710 KRT25Q7Z3Z0 450 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 FAM200AQ8TCP9 573 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 FERMT2Q96AC1 680 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 DNAJC25Q9H1X3 360 aa23.22■■□□□ 1.31
CIRBP-225ENST00000589710 ZC3H4Q9UPT8 1303 aaKnown RBP23.21■■□□□ 1.31
CIRBP-225ENST00000589710 ZBTB5O15062 677 aa23.21■■□□□ 1.31
CIRBP-225ENST00000589710 ZRSR1Q15695 479 aaKnown RBP23.21■■□□□ 1.31
CIRBP-225ENST00000589710 STX1AQ16623 288 aa23.21■■□□□ 1.31
CIRBP-225ENST00000589710 KIF4BQ2VIQ3 1234 aa23.21■■□□□ 1.31
CIRBP-225ENST00000589710 UVSSAQ2YD98 709 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms