RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PTPRTO14522 1441 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 THAP12O43422 761 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 BRD2P25440 801 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 LOC102724159A0A0B4J2E5 919 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 PLCG2P16885 1265 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 PWP2Q15269 919 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 ARMC2Q8NEN0 867 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 PASKQ96RG2 1323 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 H2AFZP0C0S5 128 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 EHHADHQ08426 723 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 GLE1Q53GS7 698 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 H2AFVQ71UI9 128 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-214ENST00000589677 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 RESTQ13127 1097 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 ACRBPQ8NEB7 543 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 LZTS2Q9BRK4 669 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 FAM133BQ5BKY9 247 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 BZW2Q9Y6E2 419 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 ANKRD65E5RJM6 399 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 IFNAR2P48551 515 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 SH3GL3Q99963 347 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 DYNC1I2Q13409 638 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 PSMD6Q15008 389 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 ARHGEF18Q6ZSZ5 1173 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 KLHDC4Q8TBB5 520 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 YTHDC2Q9H6S0 1430 aaKnown RBP16.05■□□□□ 0.16
SMARCA4-214ENST00000589677 CREB3O43889 395 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ZWINTO95229 277 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ARL1P40616 181 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 PPP1R21Q6ZMI0 780 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 GPIHBP1Q8IV16 184 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 PLBD2Q8NHP8 589 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 MAGEF1Q9HAY2 307 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ADCY8P40145 1251 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 RASSF7Q02833 373 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ATP2A3Q93084 1043 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 RIC8AQ9NPQ8 531 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 NDUFA10O95299 355 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 TUBGCP2Q9BSJ2 902 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 MAP3K7O43318 606 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 LMNAP02545 664 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 MAN1B1Q9UKM7 699 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 ATP10AO60312 1499 aa16.04■□□□□ 0.16
SMARCA4-214ENST00000589677 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 TOM1O60784 492 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 DIXDC1Q155Q3 683 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 PBKQ96KB5 322 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 SLC24A3Q9HC58 644 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 IRX1P78414 480 aaPredicted RBP16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 ARHGEF25Q86VW2 580 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 EPSTI1Q96J88 318 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 EDC4Q6P2E9 1401 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 ARHGEF5Q12774 1597 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 TAF5LO75529 589 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 CUL1Q13616 776 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 PPP4R1Q8TF05 950 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 NT5C3AQ9H0P0 336 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 CXorf56Q9H5V9 222 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 TACC3Q9Y6A5 838 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 PGRMC1O00264 195 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 PLS1Q14651 629 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 CALCRLQ16602 461 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
SMARCA4-214ENST00000589677 DNAJC8O75937 253 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 LONP1P36776 959 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 PDCLQ13371 301 aa16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 DAAM1Q9Y4D1 1078 aa16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 HSPD1P10809 573 aaKnown RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 DHTKD1Q96HY7 919 aaPredicted RBP16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 PSD3Q9NYI0 1048 aa16.02■□□□□ 0.16
SMARCA4-214ENST00000589677 MAN1A1P33908 653 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 PALM2Q8IXS6 379 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 SYMPKQ92797 1274 aaKnown RBP16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 ANGPTL2Q9UKU9 493 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 GGCXP38435 758 aa16.02■□□□□ 0.15
SMARCA4-214ENST00000589677 DRP2Q13474 957 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms