RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 IFIT1P09914 478 aaKnown RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 FOXO4P98177 505 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 HDLBPQ00341 1268 aaKnown RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 ZNF211Q13398 564 aaPredicted RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 SNAPC2Q13487 334 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 RTN1Q16799 776 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 HABP4Q5JVS0 413 aaKnown RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 BEND3Q5T5X7 828 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 TDRD7Q8NHU6 1098 aaKnown RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 GTF3C2Q8WUA4 911 aaPredicted RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 ARMC5Q96C12 935 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 WRNIP1Q96S55 665 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 TMEM39BQ9GZU3 492 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 ANO2Q9NQ90 1003 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 BIN2Q9UBW5 565 aaPredicted RBP6.99□□□□□ -1.29
LINC01539-202ENST00000589293 PCDHAC2Q9Y5I4 1007 aa6.99□□□□□ -1.29
LINC01539-202ENST00000589293 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ZBTB39O15060 712 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 EN2P19622 333 aaPredicted RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 PRMT2P55345 433 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 VGLL4Q14135 290 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 C16orf46Q6P387 395 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ERO1BQ86YB8 467 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ETFBKMTQ8IXQ9 262 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 RAET1EQ8TD07 263 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ZNF837Q96EG3 531 aaPredicted RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 FAM84BQ96KN1 310 aaPredicted RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ZCCHC17Q9NP64 241 aaKnown RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 DMGDHQ9UI17 866 aaKnown RBP6.98□□□□□ -1.29
LINC01539-202ENST00000589293 IVNS1ABPQ9Y6Y0 642 aa6.98□□□□□ -1.29
LINC01539-202ENST00000589293 ECM29Q5VYK3 1845 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 SSC5DA1L4H1 1573 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 TLR2O60603 784 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 SLC5A1P13866 664 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 UBXN2AP68543 259 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 KCNA1Q09470 495 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 B4GALNT3Q6L9W6 998 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
LINC01539-202ENST00000589293 FAM83AQ86UY5 434 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.29
LINC01539-202ENST00000589293 WDR66Q8TBY9 1149 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 RHPN1Q8TCX5 695 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 BRI3BPQ8WY22 251 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 DPF3Q92784 378 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 ZNF333Q96JL9 665 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 SUSD3Q96L08 255 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 PTPN18Q99952 460 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 ZNF341Q9BYN7 854 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 GNL3LQ9NVN8 582 aaKnown RBP6.97□□□□□ -1.29
LINC01539-202ENST00000589293 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
LINC01539-202ENST00000589293 SUGT1Q9Y2Z0 365 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 PTCH2Q9Y6C5 1203 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 CACNA1FO60840 1977 aa6.97□□□□□ -1.29
LINC01539-202ENST00000589293 TNRC18O15417 2968 aaPredicted RBP6.96□□□□□ -1.29
LINC01539-202ENST00000589293 H3BM21 787 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 PDE8BO95263 885 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
LINC01539-202ENST00000589293 CACNB3P54284 484 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 LACTBP83111 547 aaPredicted RBP6.96□□□□□ -1.3
LINC01539-202ENST00000589293 PPATQ06203 517 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 PPIL2Q13356 520 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 PUM3Q15397 648 aaKnown RBP6.96□□□□□ -1.3
LINC01539-202ENST00000589293 EPHA10Q5JZY3 1008 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 FKBP1CQ5VVH2 108 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 LRRC69Q6ZNQ3 347 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 RIPOR1Q6ZS17 1223 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 TRIM22Q8IYM9 498 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 FAM9BQ8IZU0 186 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 FAM43AQ8N2R8 423 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 SH3TC2Q8TF17 1288 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 ZKSCAN4Q969J2 545 aaPredicted RBP6.96□□□□□ -1.3
LINC01539-202ENST00000589293 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 SUCLG2Q96I99 432 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 ZDHHC15Q96MV8 337 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 TEPSINQ96N21 525 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 HTATIP2Q9BUP3 242 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 PUS3Q9BZE2 481 aaKnown RBP6.96□□□□□ -1.3
LINC01539-202ENST00000589293 NDFIP2Q9NV92 336 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 IRS2Q9Y4H2 1338 aa6.96□□□□□ -1.3
LINC01539-202ENST00000589293 BTBD19C9JJ37 291 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 PSMC4P43686 418 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 ARSJQ5FYB0 599 aaPredicted RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 MIGA2Q7L4E1 593 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 FBXO33Q7Z6M2 555 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 GPR161Q8N6U8 529 aaKnown RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 PARK7Q99497 189 aaKnown RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 MRIQ9BWK5 157 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 BICC1Q9H694 974 aaKnown RBP6.95□□□□□ -1.3
LINC01539-202ENST00000589293 PICK1Q9NRD5 415 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 RIPOR2Q9Y4F9 1068 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
LINC01539-202ENST00000589293 PDHXO00330 501 aa6.94□□□□□ -1.3
LINC01539-202ENST00000589293 ABL1P00519 1130 aa6.94□□□□□ -1.3
LINC01539-202ENST00000589293 LDHBP07195 334 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms