RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	ZNF280C	Q8ND82	737 aa		29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	GMCL1P1	Q8NEA9	526 aa		29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	SH2B1	Q9NRF2	756 aa	Predicted RBP	29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	BRPF3	Q9ULD4	1205 aa		29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	ZHX2	Q9Y6X8	837 aa		29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	COL6A3	P12111	3177 aa		29.25	■■■□□ 2.27
CIRBP-223	ENST00000589266	PHIP	Q8WWQ0	1821 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	ADCY3	O60266	1144 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	ATP2B2	Q01814	1243 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	TROAP	Q12815	778 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	CHMP4C	Q96CF2	233 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	KIAA1683	Q9H0B3	1180 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	TPCN1	Q9ULQ1	816 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266	NID2	Q14112	1375 aa		29.24	■■■□□ 2.27
CIRBP-223	ENST00000589266		A0A1W2PRG0	241 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	C19orf81	C9J6K1	198 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	ZBTB43	O43298	467 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	CD2BP2	O95400	341 aa	Known RBP	29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	ANP32A	P39687	249 aa	Known RBP	29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	USP14	P54578	494 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	HSCB	Q8IWL3	235 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	GOPC	Q9HD26	462 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	AFG3L2	Q9Y4W6	797 aa		29.23	■■■□□ 2.27
CIRBP-223	ENST00000589266	USP17L10	C9JJH3	530 aa		29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	TFRC	P02786	760 aa	Known RBP	29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	PDIA3	P30101	505 aa	Known RBP	29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	FASTKD5	Q7L8L6	764 aa	Known RBP	29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	ACER1	Q8TDN7	264 aa		29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	29.22	■■■□□ 2.27
CIRBP-223	ENST00000589266	LAMA3	Q16787	3333 aa		29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	FLT3LG	P49771	235 aa		29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	BACE1	P56817	501 aa		29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	LRRC47	Q8N1G4	583 aa	Known RBP	29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	PXYLP1	Q8TE99	480 aa		29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	VCPKMT	Q9H867	229 aa		29.21	■■■□□ 2.27
CIRBP-223	ENST00000589266	SOX1	O00570	391 aa	Predicted RBP	29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	PFKFB2	O60825	505 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	INHA	P05111	366 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	SNHG28	P0DPA3	235 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	SPP2	Q13103	211 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	BECN1	Q14457	450 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	LPAR1	Q92633	364 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	GMCL1	Q96IK5	515 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	FEZ1	Q99689	392 aa		29.2	■■■□□ 2.26
CIRBP-223	ENST00000589266	GOLGA8B	A8MQT2	603 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266		F5H6K3	240 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266		K7ELQ4	463 aa	Predicted RBP	29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	ELN	P15502	786 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	KLRC3	Q07444	240 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	ME3	Q16798	604 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	SH3D19	Q5HYK7	790 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	CCDC84	Q86UT8	332 aa	Predicted RBP	29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	DCAF4	Q8WV16	495 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	DEFB118	Q96PH6	123 aa		29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266	SLK	Q9H2G2	1235 aa	Predicted RBP	29.19	■■■□□ 2.26
CIRBP-223	ENST00000589266		A0A0G2JLL6	359 aa	Predicted RBP	29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	CCDC196	A0A1B0GTZ2	297 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	KIF5B	P33176	963 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	IRF5	Q13568	498 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	GRM4	Q14833	912 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	SLFN13	Q68D06	897 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	USP17L2	Q6R6M4	530 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	PRRT2	Q7Z6L0	340 aa	Predicted RBP	29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	MICU3	Q86XE3	530 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	FANCB	Q8NB91	859 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	LRCH3	Q96II8	777 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	TMX3	Q96JJ7	454 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	C12orf42	Q96LP6	360 aa		29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	RBM28	Q9NW13	759 aa	Known RBP	29.18	■■■□□ 2.26
CIRBP-223	ENST00000589266	TNPO2	O14787	897 aa	Known RBP	29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	PDHB	P11177	359 aa		29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	METAP2	P50579	478 aa	Known RBP eCLIP	29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	NOL8	Q76FK4	1167 aa	Known RBP	29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	CTCFL	Q8NI51	663 aa	Predicted RBP	29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	NUP133	Q8WUM0	1156 aa		29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	LARP6	Q9BRS8	491 aa	Known RBP	29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	SLC45A1	Q9Y2W3	748 aa		29.17	■■■□□ 2.26
CIRBP-223	ENST00000589266	GOLGA8A	A7E2F4	631 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	DHX16	O60231	1041 aa	Known RBP	29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	NDUFB10	O96000	172 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	GNAQ	P50148	359 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	ASPRV1	Q53RT3	343 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	GADL1	Q6ZQY3	521 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	GTF3C6	Q969F1	213 aa		29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	NAP1L2	Q9ULW6	460 aa	Predicted RBP	29.16	■■■□□ 2.26
CIRBP-223	ENST00000589266	DOCK3	Q8IZD9	2030 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	TRIM75P	A6NK02	468 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	PARP1	P09874	1014 aa	Known RBP	29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	MTMR2	Q13614	643 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	RTN1	Q16799	776 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	GPATCH4	Q5T3I0	446 aa	Known RBP	29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	LZTS2	Q9BRK4	669 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	MYL10	Q9BUA6	226 aa		29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	PAK6	Q9NQU5	681 aa	Predicted RBP	29.15	■■■□□ 2.26
CIRBP-223	ENST00000589266	PALM3	A6NDB9	673 aa	Predicted RBP	29.14	■■■□□ 2.26
CIRBP-223	ENST00000589266	SMCR8	Q8TEV9	937 aa	Predicted RBP	29.14	■■■□□ 2.26
CIRBP-223	ENST00000589266	PAWR	Q96IZ0	340 aa	Known RBP	29.14	■■■□□ 2.26
CIRBP-223	ENST00000589266	CRISPLD2	Q9H0B8	497 aa		29.14	■■■□□ 2.26
CIRBP-223	ENST00000589266	TMOD4	Q9NZQ9	345 aa		29.14	■■■□□ 2.26
CIRBP-223	ENST00000589266	WDR46	O15213	610 aa	Known RBP	29.13	■■■□□ 2.25

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