RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 IGSF1Q8N6C5 1336 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 PCDH11XQ9BZA7 1347 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 PCDH11YQ9BZA8 1340 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 ADARB2-AS1A8MUL3 147 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 SOX1O00570 391 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-210ENST00000588972 EPHA1P21709 976 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 CDC27P30260 824 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 ZEB1P37275 1124 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-210ENST00000588972 IFRD2Q12894 506 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-210ENST00000588972 AP3B2Q13367 1082 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 FXNQ16595 210 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 MAP1SQ66K74 1059 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-210ENST00000588972 RAPGEF4Q8WZA2 1011 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 MDFIQ99750 246 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 FANCLQ9NW38 375 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 CACNA2D2Q9NY47 1150 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 FRRS1LQ9P0K9 344 aa10.12□□□□□ -0.79
ATG4D-210ENST00000588972 PKD1L3Q7Z443 1732 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 PPFIA3O75145 1194 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 CDC45O75419 566 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 GSTP1P09211 210 aaKnown RBP10.11□□□□□ -0.79
ATG4D-210ENST00000588972 RRS1Q15050 365 aaKnown RBP10.11□□□□□ -0.79
ATG4D-210ENST00000588972 RUFY4Q6ZNE9 571 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 BRINP2Q9C0B6 783 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
ATG4D-210ENST00000588972 ITGB4P16144 1822 aa10.11□□□□□ -0.79
ATG4D-210ENST00000588972 hCG_2014768A0A024R1R8 64 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 SELPP16109 830 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 CDK8P49336 464 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 CABP4P57796 275 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 GDF6Q6KF10 455 aaPredicted RBP10.1□□□□□ -0.79
ATG4D-210ENST00000588972 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 USHBP1Q8N6Y0 703 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 C19orf47Q8N9M1 422 aaKnown RBP10.1□□□□□ -0.79
ATG4D-210ENST00000588972 TTC9Q92623 222 aa10.1□□□□□ -0.79
ATG4D-210ENST00000588972 ESYT3A0FGR9 886 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 H3BRJ5 948 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 GJB6O95452 261 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 ARAFP10398 606 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 TNNT2P45379 298 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-210ENST00000588972 IGBP1P78318 339 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-210ENST00000588972 PPP2R5EQ16537 467 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 PSAPL1Q6NUJ1 521 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 FILIP1Q7Z7B0 1213 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-210ENST00000588972 ANTXR1Q9H6X2 564 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 IFT57Q9NWB7 429 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 FLT4P35916 1363 aa10.09□□□□□ -0.79
ATG4D-210ENST00000588972 KIF13BQ9NQT8 1826 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 IBSPP21815 317 aaPredicted RBP10.08□□□□□ -0.8
ATG4D-210ENST00000588972 ADH6P28332 368 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
ATG4D-210ENST00000588972 APPBP2Q92624 585 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 SOX17Q9H6I2 414 aaPredicted RBP10.08□□□□□ -0.8
ATG4D-210ENST00000588972 GMPR2Q9P2T1 348 aaKnown RBP10.08□□□□□ -0.8
ATG4D-210ENST00000588972 KNSTRNQ9Y448 316 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 INSRP06213 1382 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
ATG4D-210ENST00000588972 KIAA1551Q9HCM1 1747 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 PXDNLA1KZ92 1463 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 A0A1W2PQH9 124 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 MEIS3P2A8K0S8 358 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 B2RBV5 119 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
ATG4D-210ENST00000588972 MX2P20592 715 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 SQSTM1Q13501 440 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 CC2D1BQ5T0F9 858 aaKnown RBP10.07□□□□□ -0.8
ATG4D-210ENST00000588972 AMIGO3Q86WK7 504 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 FCHSD1Q86WN1 690 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 HOMER1Q86YM7 354 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 CACTIN-AS1Q8N1I8 211 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 GPBAR1Q8TDU6 330 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 TMEM260Q9NX78 707 aa10.07□□□□□ -0.8
ATG4D-210ENST00000588972 NOP58Q9Y2X3 529 aaKnown RBP10.07□□□□□ -0.8
ATG4D-210ENST00000588972 GFRA2O00451 464 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 CYP27B1O15528 508 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 DNAJC6O75061 913 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 GSTM4Q03013 218 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 LRRFIP1Q32MZ4 808 aaKnown RBP10.06□□□□□ -0.8
ATG4D-210ENST00000588972 TTC6Q86TZ1 520 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 TM9SF2Q99805 663 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 ZC3H12CQ9C0D7 883 aaKnown RBP10.06□□□□□ -0.8
ATG4D-210ENST00000588972 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 PCDHA4Q9UN74 947 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 COL4A3BPQ9Y5P4 624 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 WDR90Q96KV7 1748 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
ATG4D-210ENST00000588972 RAB11FIP3O75154 756 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 TOMM70O94826 608 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 HTR3BO95264 441 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 CDC25BP30305 580 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 GAS6Q14393 721 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 GRIK5Q16478 980 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 C2orf27AQ580R0 203 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 WIPI1Q5MNZ9 446 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms