RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 MCCP23508 829 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 CNGA1P29973 690 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 MROH8Q9H579 483 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 DIAPH3Q9NSV4 1193 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 STX8Q9UNK0 236 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
RFX1-204ENST00000588885 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
RFX1-204ENST00000588885 ALPK3Q96L96 1907 aa13.68□□□□□ -0.22
RFX1-204ENST00000588885 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 PGK2P07205 417 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 HOXC6P09630 235 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 FCER1AP12319 257 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 PRAMEF19Q5SWL8 479 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 RIOX2Q8IUF8 465 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 MMP19Q99542 508 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
RFX1-204ENST00000588885 TMEM232C9JQI7 657 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 EVI5O60447 810 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 ZBED4O75132 1171 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 SLC25A27O95847 323 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 BMP3P12645 472 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 SNAP25P60880 206 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
RFX1-204ENST00000588885 SNRNP48Q6IEG0 339 aaKnown RBP13.66□□□□□ -0.22
RFX1-204ENST00000588885 RASGRP2Q7LDG7 609 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 PRPF38AQ8NAV1 312 aaKnown RBP13.66□□□□□ -0.22
RFX1-204ENST00000588885 GMCL1P1Q8NEA9 526 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 TRPV1Q8NER1 839 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 REPS2Q8NFH8 660 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
RFX1-204ENST00000588885 FEM1BQ9UK73 627 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 ZNF214Q9UL59 606 aaPredicted RBP13.66□□□□□ -0.22
RFX1-204ENST00000588885 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
RFX1-204ENST00000588885 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 ORC4O43929 436 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 SLC1A4P43007 532 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
RFX1-204ENST00000588885 MFAP1P55081 439 aaKnown RBP13.65□□□□□ -0.22
RFX1-204ENST00000588885 KCTD2Q14681 263 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 ANO1Q5XXA6 986 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 OGDHLQ9ULD0 1010 aa13.65□□□□□ -0.22
RFX1-204ENST00000588885 PLIN4Q96Q06 1357 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 GSPT1P15170 499 aaKnown RBP13.64□□□□□ -0.23
RFX1-204ENST00000588885 CAPN2P17655 700 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 MFSD6Q6ZSS7 791 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 HOMER2Q9NSB8 354 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 SLC5A4Q9NY91 659 aa13.64□□□□□ -0.23
RFX1-204ENST00000588885 RANBP2P49792 3224 aaKnown RBP13.64□□□□□ -0.23
RFX1-204ENST00000588885 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
RFX1-204ENST00000588885 HIP1O00291 1037 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 ZNF213O14771 459 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 FGRP09769 529 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
RFX1-204ENST00000588885 PPP4R3BQ5MIZ7 849 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 OLFML2BQ68BL8 750 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 MAML3Q96JK9 1138 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 C11orf49Q9H6J7 331 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
RFX1-204ENST00000588885 SYNPO2Q9UMS6 1093 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 DNAH12Q6ZR08 3092 aa13.63□□□□□ -0.23
RFX1-204ENST00000588885 IGHA2P01877 340 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 CYBAP13498 195 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 SLC16A2P36021 539 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
RFX1-204ENST00000588885 STAT2P52630 851 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 TTBK2Q6IQ55 1244 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 CCDC174Q6PII3 467 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 ANKLE1Q8NAG6 615 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 CHURC1Q8WUH1 139 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 STAG1Q8WVM7 1258 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 AGBL1Q96MI9 1066 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 TMEM47Q9BQJ4 181 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 IL25Q9H293 177 aa13.62□□□□□ -0.23
RFX1-204ENST00000588885 RLFQ13129 1914 aa13.61□□□□□ -0.23
RFX1-204ENST00000588885 TAL1P17542 331 aaPredicted RBP13.61□□□□□ -0.23
RFX1-204ENST00000588885 COPB2P35606 906 aa13.61□□□□□ -0.23
RFX1-204ENST00000588885 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
RFX1-204ENST00000588885 GPCPD1Q9NPB8 672 aa13.61□□□□□ -0.23
RFX1-204ENST00000588885 COL11A1P12107 1806 aaPredicted RBP13.61□□□□□ -0.23
RFX1-204ENST00000588885 ZMYM6O95789 1325 aa13.61□□□□□ -0.23
RFX1-204ENST00000588885 NEDD4P46934 1319 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms