RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 PIGSQ96S52 555 aa25.67■■□□□ 1.7
ATG4D-209ENST00000588857 ZNF408Q9H9D4 720 aa25.67■■□□□ 1.7
ATG4D-209ENST00000588857 SH3GLB2Q9NR46 395 aa25.67■■□□□ 1.7
ATG4D-209ENST00000588857 TLL2Q9Y6L7 1015 aa25.67■■□□□ 1.7
ATG4D-209ENST00000588857 PTPRAP18433 802 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 KIF23Q02241 960 aaPredicted RBP25.66■■□□□ 1.7
ATG4D-209ENST00000588857 IKQ13123 557 aaPredicted RBP25.66■■□□□ 1.7
ATG4D-209ENST00000588857 CHAMP1Q96JM3 812 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 WDR18Q9BV38 432 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 KIAA1683Q9H0B3 1180 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 OTOFQ9HC10 1997 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 PHIPQ8WWQ0 1821 aa25.66■■□□□ 1.7
ATG4D-209ENST00000588857 TMEM232C9JQI7 657 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 NCLP19338 710 aaKnown RBP25.65■■□□□ 1.7
ATG4D-209ENST00000588857 DNM1Q05193 864 aaKnown RBP25.65■■□□□ 1.7
ATG4D-209ENST00000588857 HEATR3Q7Z4Q2 680 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 BRAPQ7Z569 592 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 PHF20Q9BVI0 1012 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 JMJD4Q9H9V9 463 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 CSADQ9Y600 493 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 USP17L10C9JJH3 530 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 VEGFBP49765 207 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 TTLL12Q14166 644 aaPredicted RBP25.65■■□□□ 1.7
ATG4D-209ENST00000588857 KIAA1755Q5JYT7 1200 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 SAPCD2Q86UD0 394 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 GPKOWQ92917 476 aaPredicted RBP eCLIP25.65■■□□□ 1.7
ATG4D-209ENST00000588857 BRMS1Q9HCU9 246 aa25.65■■□□□ 1.7
ATG4D-209ENST00000588857 PAPPA2Q9BXP8 1791 aa25.64■■□□□ 1.7
ATG4D-209ENST00000588857 USP14P54578 494 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 FAM83BQ5T0W9 1011 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 FAM173BQ6P4H8 233 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 DIS3L2Q8IYB7 885 aaKnown RBP25.64■■□□□ 1.69
ATG4D-209ENST00000588857 FAM177A1Q8N128 213 aaPredicted RBP25.64■■□□□ 1.69
ATG4D-209ENST00000588857 ZNF280CQ8ND82 737 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 CCDC148Q8NFR7 591 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 LPAR1Q92633 364 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 BARHL2Q9NY43 387 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 ZHX2Q9Y6X8 837 aa25.64■■□□□ 1.69
ATG4D-209ENST00000588857 PNMA6FA0A0J9YX94 578 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 CALML3P27482 149 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 NLRP5P59047 1200 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 KRT85P78386 507 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 SPP2Q13103 211 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 WWC2Q6AWC2 1192 aa25.63■■□□□ 1.69
ATG4D-209ENST00000588857 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.63■■□□□ 1.69
ATG4D-209ENST00000588857 CCDC12Q8WUD4 166 aaPredicted RBP25.63■■□□□ 1.69
ATG4D-209ENST00000588857 FOXP1Q9H334 677 aaPredicted RBP25.63■■□□□ 1.69
ATG4D-209ENST00000588857 KIF28PB7ZC32 967 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 hCG_1984214I3L0E3 225 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 PTMSP20962 102 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 U2AF2P26368 475 aaKnown RBP eCLIP25.62■■□□□ 1.69
ATG4D-209ENST00000588857 STAT2P52630 851 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 MTMR2Q13614 643 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 VGLL4Q14135 290 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 NBR1Q14596 966 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 SYDE2Q5VT97 1194 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 BTNL9Q6UXG8 535 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 ZNF713Q8N859 430 aaPredicted RBP25.62■■□□□ 1.69
ATG4D-209ENST00000588857 SHISA4Q96DD7 197 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 CNPY2Q9Y2B0 182 aa25.62■■□□□ 1.69
ATG4D-209ENST00000588857 BTBD18B2RXH4 712 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 STXBP3O00186 592 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 ZBTB5O15062 677 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 KRT2P35908 639 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 CHURC1Q8WUH1 139 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 ZNF396Q96N95 335 aaPredicted RBP25.61■■□□□ 1.69
ATG4D-209ENST00000588857 BACE1P56817 501 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 ARMC9Q7Z3E5 817 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 ANKRD13AQ8IZ07 590 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 MTMR8Q96EF0 704 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 GBA2Q9HCG7 927 aaPredicted RBP25.61■■□□□ 1.69
ATG4D-209ENST00000588857 CFAP45Q9UL16 551 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 SNCAIPQ9Y6H5 919 aa25.61■■□□□ 1.69
ATG4D-209ENST00000588857 PCNTO95613 3336 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 TRIM75PA6NK02 468 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 WDR46O15213 610 aaKnown RBP25.6■■□□□ 1.69
ATG4D-209ENST00000588857 NAPAP54920 295 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 CSPP1Q1MSJ5 1256 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 ATL3Q6DD88 541 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 NOSTRINQ8IVI9 506 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 C2orf69Q8N8R5 385 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 HHIPL1Q96JK4 782 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 FEM1BQ9UK73 627 aa25.6■■□□□ 1.69
ATG4D-209ENST00000588857 C19orf81C9J6K1 198 aa25.59■■□□□ 1.69
ATG4D-209ENST00000588857 PLA2G6O60733 806 aa25.59■■□□□ 1.69
ATG4D-209ENST00000588857 CDC37Q16543 378 aaPredicted RBP25.59■■□□□ 1.69
ATG4D-209ENST00000588857 MAP3K11Q16584 847 aa25.59■■□□□ 1.69
ATG4D-209ENST00000588857 GALNT17Q6IS24 598 aa25.59■■□□□ 1.69
ATG4D-209ENST00000588857 FAM160B2Q86V87 743 aa25.59■■□□□ 1.69
ATG4D-209ENST00000588857 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.59■■□□□ 1.69
ATG4D-209ENST00000588857 TFIP11Q9UBB9 837 aaKnown RBP25.59■■□□□ 1.69
ATG4D-209ENST00000588857 FIBPO43427 364 aa25.58■■□□□ 1.69
ATG4D-209ENST00000588857 PRPF40AO75400 957 aaKnown RBP25.58■■□□□ 1.69
ATG4D-209ENST00000588857 SCAND2PQ9GZW5 306 aaPredicted RBP25.58■■□□□ 1.69
ATG4D-209ENST00000588857 PRR12Q9ULL5 1215 aa25.58■■□□□ 1.69
ATG4D-209ENST00000588857 QRICH1Q2TAL8 776 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 MYSM1Q5VVJ2 828 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 TYW1BQ6NUM6 668 aa25.57■■□□□ 1.68
ATG4D-209ENST00000588857 PAXIP1Q6ZW49 1069 aaPredicted RBP25.57■■□□□ 1.68
ATG4D-209ENST00000588857 MOB2Q70IA6 237 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms