RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 SMCHD1A6NHR9 2005 aa21.36■■□□□ 1.01
HDAC5-209ENST00000588703 BMP3P12645 472 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 CYBAP13498 195 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 COPB2P35606 906 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
HDAC5-209ENST00000588703 RASGRP2Q7LDG7 609 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 TBC1D10CQ8IV04 446 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 GMCL1Q96IK5 515 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 MMP19Q99542 508 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 TEX13BQ9BXU2 312 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 SLC38A10Q9HBR0 1119 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 DIAPH3Q9NSV4 1193 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 STX8Q9UNK0 236 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 RIPK3Q9Y572 518 aa21.35■■□□□ 1.01
HDAC5-209ENST00000588703 ATP2A1O14983 1001 aa21.34■■□□□ 1.01
HDAC5-209ENST00000588703 PGK2P07205 417 aa21.34■■□□□ 1.01
HDAC5-209ENST00000588703 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
HDAC5-209ENST00000588703 MFAP1P55081 439 aaKnown RBP21.34■■□□□ 1.01
HDAC5-209ENST00000588703 RRP12Q5JTH9 1297 aaKnown RBP21.34■■□□□ 1.01
HDAC5-209ENST00000588703 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
HDAC5-209ENST00000588703 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
HDAC5-209ENST00000588703 MCM3APO60318 1980 aa21.34■■□□□ 1.01
HDAC5-209ENST00000588703 PFASO15067 1338 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 MCCP23508 829 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 TTC22Q5TAA0 569 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 IL25Q9H293 177 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 TOMM22Q9NS69 142 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 SLC5A4Q9NY91 659 aa21.33■■□□□ 1.01
HDAC5-209ENST00000588703 DDX20Q9UHI6 824 aaKnown RBP21.33■■□□□ 1.01
HDAC5-209ENST00000588703 TMEM232C9JQI7 657 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 HIP1O00291 1037 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 ZBED4O75132 1171 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 CNGA1P29973 690 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 SLC1A4P43007 532 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 AKNAD1Q5T1N1 836 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 CPXCR1Q8N123 301 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 STAG1Q8WVM7 1258 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 C11orf49Q9H6J7 331 aa21.32■■□□□ 1
HDAC5-209ENST00000588703 RAVER2Q9HCJ3 691 aaKnown RBP21.32■■□□□ 1
HDAC5-209ENST00000588703 COL6A1P12109 1028 aa21.31■■□□□ 1
HDAC5-209ENST00000588703 STAT2P52630 851 aa21.31■■□□□ 1
HDAC5-209ENST00000588703 KCTD2Q14681 263 aa21.31■■□□□ 1
HDAC5-209ENST00000588703 NEDD4P46934 1319 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 EVI5O60447 810 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 SLC34A2O95436 690 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 HABP4Q5JVS0 413 aaKnown RBP21.3■■□□□ 1
HDAC5-209ENST00000588703 PRAMEF19Q5SWL8 479 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 MFSD6Q6ZSS7 791 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 KCTD1Q719H9 257 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.3■■□□□ 1
HDAC5-209ENST00000588703 FAM160B2Q86V87 743 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 TCP11L1Q9NUJ3 509 aa21.3■■□□□ 1
HDAC5-209ENST00000588703 ISY1Q9ULR0 285 aaKnown RBP21.3■■□□□ 1
HDAC5-209ENST00000588703 COLQQ9Y215 455 aaPredicted RBP21.3■■□□□ 1
HDAC5-209ENST00000588703 DIS3Q9Y2L1 958 aaKnown RBP21.3■■□□□ 1
HDAC5-209ENST00000588703 MSCO60682 206 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 PLA2G6O60733 806 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 PCP11498 1178 aaKnown RBP21.29■■□□□ 1
HDAC5-209ENST00000588703 SLC4A3P48751 1232 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 OAZ1P54368 228 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 RCSD1Q6JBY9 416 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 CHURC1Q8WUH1 139 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 TMEM47Q9BQJ4 181 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 MTMR7Q9Y216 660 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 CTDP1Q9Y5B0 961 aaPredicted RBP21.29■■□□□ 1
HDAC5-209ENST00000588703 NR2E3Q9Y5X4 410 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 ZNF536O15090 1300 aa21.29■■□□□ 1
HDAC5-209ENST00000588703 DNAJC25-GNG10A0A024R161 153 aa21.28■■□□□ 1
HDAC5-209ENST00000588703 FDX1P10109 184 aa21.28■■□□□ 1
HDAC5-209ENST00000588703 TOP1P11387 765 aaKnown RBP21.28■■□□□ 1
HDAC5-209ENST00000588703 TINF2Q9BSI4 451 aa21.28■■□□□ 1
HDAC5-209ENST00000588703 DSCC1Q9BVC3 393 aa21.28■■□□□ 1
HDAC5-209ENST00000588703 LCTP09848 1927 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 ZNF213O14771 459 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 SEPT4O43236 478 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 IKQ13123 557 aaPredicted RBP21.27■■□□□ 1
HDAC5-209ENST00000588703 ANO1Q5XXA6 986 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 DCAF4Q8WV16 495 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 RNF41Q9H4P4 317 aaPredicted RBP21.27■■□□□ 1
HDAC5-209ENST00000588703 PRR12Q9ULL5 1215 aa21.27■■□□□ 1
HDAC5-209ENST00000588703 TAL1P17542 331 aaPredicted RBP21.26■□□□□ 0.99
HDAC5-209ENST00000588703 SNAP25P60880 206 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 CCDC96Q2M329 555 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 C7orf61Q8IZ16 206 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 FGD4Q96M96 766 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 AGBL1Q96MI9 1066 aa21.26■□□□□ 0.99
HDAC5-209ENST00000588703 TTBK2Q6IQ55 1244 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 ESR2Q92731 530 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 DDX11Q96FC9 970 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 PRO3102Q9H379 93 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 HOMER2Q9NSB8 354 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 NRBP1Q9UHY1 535 aa21.25■□□□□ 0.99
HDAC5-209ENST00000588703 LRRC26Q2I0M4 334 aa21.24■□□□□ 0.99
HDAC5-209ENST00000588703 CCDC174Q6PII3 467 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms