RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 OGDHLQ9ULD0 1010 aa23.11■■□□□ 1.29
TPM4-208ENST00000588410 ZNF213O14771 459 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 MCCP23508 829 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 AKNAD1Q5T1N1 836 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 CHURC1Q8WUH1 139 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 CHMP4CQ96CF2 233 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 BRCA2P51587 3418 aa23.1■■□□□ 1.29
TPM4-208ENST00000588410 STAT2P52630 851 aa23.09■■□□□ 1.29
TPM4-208ENST00000588410 FAM160B2Q86V87 743 aa23.09■■□□□ 1.29
TPM4-208ENST00000588410 STAG1Q8WVM7 1258 aa23.09■■□□□ 1.29
TPM4-208ENST00000588410 MTMR7Q9Y216 660 aa23.09■■□□□ 1.29
TPM4-208ENST00000588410 GREB1LQ9C091 1923 aaPredicted RBP23.09■■□□□ 1.29
TPM4-208ENST00000588410 PLXNB2O15031 1838 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 ATP2A1O14983 1001 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 FDX1P10109 184 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 DIS3LQ8TF46 1054 aaKnown RBP23.08■■□□□ 1.29
TPM4-208ENST00000588410 NBPF3Q9H094 633 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 SLC38A10Q9HBR0 1119 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 RAVER2Q9HCJ3 691 aaKnown RBP23.08■■□□□ 1.29
TPM4-208ENST00000588410 NR2E3Q9Y5X4 410 aa23.08■■□□□ 1.29
TPM4-208ENST00000588410 PDE4DIPQ5VU43 2346 aa23.08■■□□□ 1.28
TPM4-208ENST00000588410 DOCK3Q8IZD9 2030 aa23.08■■□□□ 1.28
TPM4-208ENST00000588410 MSCO60682 206 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 PGK2P07205 417 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 GSPT1P15170 499 aaKnown RBP23.07■■□□□ 1.28
TPM4-208ENST00000588410 RCSD1Q6JBY9 416 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 TBC1D10CQ8IV04 446 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 ESR2Q92731 530 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 MAML3Q96JK9 1138 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 DSCC1Q9BVC3 393 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 TCP11L1Q9NUJ3 509 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 DDX20Q9UHI6 824 aaKnown RBP23.07■■□□□ 1.28
TPM4-208ENST00000588410 CTNNA3Q9UI47 895 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 A0A0G2JMZ2 1700 aa23.07■■□□□ 1.28
TPM4-208ENST00000588410 H0YGN5 161 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 EVI5O60447 810 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 TOP1P11387 765 aaKnown RBP23.06■■□□□ 1.28
TPM4-208ENST00000588410 OAZ1P54368 228 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 CCDC96Q2M329 555 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 LHX8Q68G74 356 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 KCTD1Q719H9 257 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 DDX11Q96FC9 970 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 C11orf49Q9H6J7 331 aa23.06■■□□□ 1.28
TPM4-208ENST00000588410 CYBAP13498 195 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 NOVP48745 357 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 IMMTQ16891 758 aaKnown RBP23.05■■□□□ 1.28
TPM4-208ENST00000588410 DCAF4Q8WV16 495 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 RUFY2Q8WXA3 655 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 FBXO40Q9UH90 709 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 DIS3Q9Y2L1 958 aaKnown RBP23.05■■□□□ 1.28
TPM4-208ENST00000588410 RIPK3Q9Y572 518 aa23.05■■□□□ 1.28
TPM4-208ENST00000588410 PLA2G6O60733 806 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 IGHA2P01877 340 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 NT5C2P49902 561 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 ZNF792Q3KQV3 632 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 TRPV1Q8NER1 839 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 TMEM47Q9BQJ4 181 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 RLFQ13129 1914 aa23.04■■□□□ 1.28
TPM4-208ENST00000588410 CHST13Q8NET6 341 aa23.03■■□□□ 1.28
TPM4-208ENST00000588410 TTC14Q96N46 770 aa23.03■■□□□ 1.28
TPM4-208ENST00000588410 MKI67P46013 3256 aaKnown RBP23.03■■□□□ 1.28
TPM4-208ENST00000588410 NEDD4P46934 1319 aa23.03■■□□□ 1.28
TPM4-208ENST00000588410 RAD50Q92878 1312 aa23.03■■□□□ 1.28
TPM4-208ENST00000588410 MNX1P50219 401 aaPredicted RBP23.02■■□□□ 1.28
TPM4-208ENST00000588410 CCDC178Q5BJE1 867 aa23.02■■□□□ 1.28
TPM4-208ENST00000588410 PRAMEF19Q5SWL8 479 aa23.02■■□□□ 1.28
TPM4-208ENST00000588410 ANKRD35Q8N283 1001 aa23.02■■□□□ 1.28
TPM4-208ENST00000588410 TINF2Q9BSI4 451 aa23.02■■□□□ 1.28
TPM4-208ENST00000588410 HOMER2Q9NSB8 354 aa23.02■■□□□ 1.28
TPM4-208ENST00000588410 SEPT4O43236 478 aa23.01■■□□□ 1.27
TPM4-208ENST00000588410 CCDC174Q6PII3 467 aa23.01■■□□□ 1.27
TPM4-208ENST00000588410 IQCA1Q86XH1 822 aa23.01■■□□□ 1.27
TPM4-208ENST00000588410 NRBP1Q9UHY1 535 aa23.01■■□□□ 1.27
TPM4-208ENST00000588410 PRR12Q9ULL5 1215 aa23.01■■□□□ 1.27
TPM4-208ENST00000588410 KDM4AO75164 1064 aa23■■□□□ 1.27
TPM4-208ENST00000588410 CHMLP26374 656 aa23■■□□□ 1.27
TPM4-208ENST00000588410 TKFCQ3LXA3 575 aa23■■□□□ 1.27
TPM4-208ENST00000588410 RASGRP2Q7LDG7 609 aa23■■□□□ 1.27
TPM4-208ENST00000588410 ZKSCAN3Q9BRR0 538 aa23■■□□□ 1.27
TPM4-208ENST00000588410 ACAD9Q9H845 621 aa23■■□□□ 1.27
TPM4-208ENST00000588410 CNPY2Q9Y2B0 182 aa23■■□□□ 1.27
TPM4-208ENST00000588410 ZNF236Q9UL36 1845 aa23■■□□□ 1.27
TPM4-208ENST00000588410 MSL3Q8N5Y2 521 aaKnown RBP22.99■■□□□ 1.27
TPM4-208ENST00000588410 ARRDC4Q8NCT1 418 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 AGBL1Q96MI9 1066 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 KRT23Q9C075 422 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 IL25Q9H293 177 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 CNNM2Q9H8M5 875 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 GPCPD1Q9NPB8 672 aa22.99■■□□□ 1.27
TPM4-208ENST00000588410 FRMPD2Q68DX3 1309 aaPredicted RBP22.99■■□□□ 1.27
TPM4-208ENST00000588410 B4E1Z4 1266 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 ALAS1P13196 640 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 SLC16A2P36021 539 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 SNAP25P60880 206 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 ANO1Q5XXA6 986 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.98■■□□□ 1.273e-7■□□□□ 8.7
TPM4-208ENST00000588410 DGKHQ86XP1 1220 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 RNF146Q9NTX7 359 aa22.98■■□□□ 1.27
TPM4-208ENST00000588410 DNAJC25-GNG10A0A024R161 153 aa22.97■■□□□ 1.27
TPM4-208ENST00000588410 MYCNP04198 464 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms