RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 C20orf173Q96LM9 149 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 PRDM14Q9GZV8 571 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 CNNM2Q9H8M5 875 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 TNFRSF10DQ9UBN6 386 aa5.91□□□□□ -1.46
VPS4B-203ENST00000588323 ENDOUP21128 410 aaKnown RBP5.9□□□□□ -1.46
VPS4B-203ENST00000588323 SDHBP21912 280 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 VIPR1P32241 457 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 CCNFP41002 786 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 CRKP46108 304 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 GALNT18Q6P9A2 607 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 GK5Q6ZS86 529 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 ATG4CQ96DT6 458 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 ZNF512BQ96KM6 892 aaPredicted RBP5.9□□□□□ -1.46
VPS4B-203ENST00000588323 KCNC2Q96PR1 638 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 EHMT1Q9H9B1 1298 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 CHST7Q9NS84 486 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 TAF6LQ9Y6J9 622 aa5.9□□□□□ -1.46
VPS4B-203ENST00000588323 WTIPA6NIX2 430 aaPredicted RBP5.89□□□□□ -1.47
VPS4B-203ENST00000588323 MEIS1O00470 390 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 ABLIM1O14639 778 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 MPOP05164 745 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 ARL4AP40617 200 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 SEZ6Q53EL9 994 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 HS2ST1Q7LGA3 356 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 MARCH10Q8NA82 808 aaPredicted RBP5.89□□□□□ -1.47
VPS4B-203ENST00000588323 PLCD4Q9BRC7 762 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 MKRN2Q9H000 416 aaKnown RBP5.89□□□□□ -1.47
VPS4B-203ENST00000588323 CNTD2Q9H8S5 307 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 GGT7Q9UJ14 662 aa5.89□□□□□ -1.47
VPS4B-203ENST00000588323 GPR55Q9Y2T6 319 aaPredicted RBP5.89□□□□□ -1.47
VPS4B-203ENST00000588323 FADS2P1A8MWK0 482 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 N4BP3O15049 544 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 MCM4P33991 863 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 EPHB3P54753 998 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 YBX1P67809 324 aaKnown RBP5.88□□□□□ -1.47
VPS4B-203ENST00000588323 CLCQ05315 142 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 APOBRQ0VD83 1088 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 LAPTM5Q13571 262 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 CCDC27Q2M243 656 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 LRRFIP1Q32MZ4 808 aaKnown RBP5.88□□□□□ -1.47
VPS4B-203ENST00000588323 HSF5Q4G112 596 aaPredicted RBP5.88□□□□□ -1.47
VPS4B-203ENST00000588323 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 REXO1Q8N1G1 1221 aaKnown RBP5.88□□□□□ -1.47
VPS4B-203ENST00000588323 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 CDADC1Q9BWV3 514 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 FBXL21Q9UKT6 434 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 MINPP1Q9UNW1 487 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 PCDHB12Q9Y5F1 795 aa5.88□□□□□ -1.47
VPS4B-203ENST00000588323 A0A0G2JLL6 359 aaPredicted RBP5.87□□□□□ -1.47
VPS4B-203ENST00000588323 TRIM13O60858 407 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 SASH1O94885 1247 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 NME1P15531 152 aaKnown RBP5.87□□□□□ -1.47
VPS4B-203ENST00000588323 ZNF165P49910 485 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 AFF3P51826 1226 aaKnown RBP5.87□□□□□ -1.47
VPS4B-203ENST00000588323 ERVFRD-1P60508 538 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 TMEM62Q0P6H9 643 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
VPS4B-203ENST00000588323 BCL11AQ9H165 835 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 GFOD1Q9NXC2 390 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 UBP1Q9NZI7 540 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 ADAMTS1Q9UHI8 967 aa5.87□□□□□ -1.47
VPS4B-203ENST00000588323 BMP8BP34820 402 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 CDR1P51861 262 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 NFIXQ14938 502 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 KIR3DS1Q14943 382 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 TMEM192Q8IY95 271 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 MZB1Q8WU39 189 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 NKD1Q969G9 470 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 SLC6A18Q96N87 628 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 ERVK13-1Q9NX77 482 aa5.86□□□□□ -1.47
VPS4B-203ENST00000588323 A0A1W2PQ45 241 aaPredicted RBP5.85□□□□□ -1.47
VPS4B-203ENST00000588323 A0A1W2PQY0 241 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 TNFRSF10CO14798 259 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 FOXD2O60548 495 aaPredicted RBP5.85□□□□□ -1.47
VPS4B-203ENST00000588323 ZNF205O95201 554 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 PRKCAP17252 672 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 CYP4F8P98187 520 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 AUHQ13825 339 aaKnown RBP5.85□□□□□ -1.47
VPS4B-203ENST00000588323 CNKSR3Q6P9H4 555 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 TMC6Q7Z403 805 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 SLCO6A1Q86UG4 719 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 NUP43Q8NFH3 380 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 ANTXR1Q9H6X2 564 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 KLHL14Q9P2G3 628 aa5.85□□□□□ -1.47
VPS4B-203ENST00000588323 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 NUDT19A8MXV4 375 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 IRS4O14654 1257 aaPredicted RBP5.84□□□□□ -1.47
VPS4B-203ENST00000588323 VAV1P15498 845 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 CTSKP43235 329 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 ZNF326Q5BKZ1 582 aaKnown RBP5.84□□□□□ -1.47
VPS4B-203ENST00000588323 CRTC3Q6UUV7 619 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 DHRS1Q96LJ7 313 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 DSCC1Q9BVC3 393 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 BCL2L13Q9BXK5 485 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 RTEL1Q9NZ71 1219 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 PRR13Q9NZ81 148 aa5.84□□□□□ -1.47
VPS4B-203ENST00000588323 A0A1W2PQ27 194 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 A0A1W2PQ64 194 aa5.83□□□□□ -1.48
VPS4B-203ENST00000588323 A0A1W2PQC6 194 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms