RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 JAG1P78504 1218 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 RILPL1Q5EBL4 403 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 FAM173BQ6P4H8 233 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 AS3MTQ9HBK9 375 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 BARHL2Q9NY43 387 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 VPS54Q9P1Q0 977 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 KCNJ14Q9UNX9 436 aa12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 FRMPD2Q68DX3 1309 aaPredicted RBP12.08□□□□□ -0.48
CHMP1B-202ENST00000588284 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 hCG_1642624A0A1W2PR95 340 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 UBE2Q2LH0YL09 131 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 PLA2G6O60733 806 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 YEATS4O95619 227 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 NDUFB10O96000 172 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 BTNL9Q6UXG8 535 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 BICD2Q8TD16 824 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 LEO1Q8WVC0 666 aaPredicted RBP12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 PIBF1Q8WXW3 757 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 PICK1Q9NRD5 415 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 ISY1Q9ULR0 285 aaKnown RBP12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
CHMP1B-202ENST00000588284 A0A1W2PRG0 241 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ZBTB5O15062 677 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 MAP3K13O43283 966 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 PPP1R12BO60237 982 aaPredicted RBP12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 NF2P35240 595 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 USP14P54578 494 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 STK38Q15208 465 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 SF3A1Q15459 793 aaKnown RBP12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ANO1Q5XXA6 986 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 KCTD1Q719H9 257 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 HEATR3Q7Z4Q2 680 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 FAM160B2Q86V87 743 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ADGRF4Q8IZF3 695 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 BLIDQ8IZY5 108 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 JMYQ8N9B5 988 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 LPAR1Q92633 364 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 CHAMP1Q96JM3 812 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 USP28Q96RU2 1077 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 PIGSQ96S52 555 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 JMJD4Q9H9V9 463 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 GDPD2Q9HCC8 539 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 PCDHA4Q9UN74 947 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 CEP131Q9UPN4 1083 aa12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 SCAF8Q9UPN6 1271 aaKnown RBP12.06□□□□□ -0.48
CHMP1B-202ENST00000588284 ESYT2A0FGR8 921 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 KIF28PB7ZC32 967 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 STXBP3O00186 592 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 BMP15O95972 392 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 NASPP49321 788 aaPredicted RBP12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 NAPAP54920 295 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 SHROOM1Q2M3G4 852 aaPredicted RBP12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 SLC35G1Q2M3R5 365 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 WWC2Q6AWC2 1192 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 TTBK2Q6IQ55 1244 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 PPP1R18Q6NYC8 613 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 HOMER1Q86YM7 354 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 DAGLBQ8NCG7 672 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 KLRG1Q96E93 195 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 FEZ1Q99689 392 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 KIAA1683Q9H0B3 1180 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 TAF1DQ9H5J8 278 aaPredicted RBP12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
CHMP1B-202ENST00000588284 GOLGB1Q14789 3259 aaKnown RBP12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 SMCO2A6NFE2 343 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 ECE1P42892 770 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 CLCN6P51797 869 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 MRPL12P52815 198 aaKnown RBP12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 CEBPZQ03701 1054 aaKnown RBP12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 NOL9Q5SY16 702 aaKnown RBP12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 SYDE2Q5VT97 1194 aa12.04□□□□□ -0.48
CHMP1B-202ENST00000588284 MCTP2Q6DN12 878 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms