RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PHF24Q9UPV7 400 aa20.07■□□□□ 0.8
LINC01842-201ENST00000588275 DIS3Q9Y2L1 958 aaKnown RBP20.07■□□□□ 0.8
LINC01842-201ENST00000588275 ZFYP08048 801 aaPredicted RBP20.06■□□□□ 0.8
LINC01842-201ENST00000588275 ZNF865P0CJ78 1059 aaPredicted RBP20.06■□□□□ 0.8
LINC01842-201ENST00000588275 GNAT2P19087 354 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 TLE2Q04725 743 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 C9orf50Q5SZB4 431 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 LRRC47Q8N1G4 583 aaKnown RBP20.06■□□□□ 0.8
LINC01842-201ENST00000588275 KIFC2Q96AC6 838 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 DCTPP1Q9H773 170 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 ZHX1Q9UKY1 873 aaPredicted RBP20.06■□□□□ 0.8
LINC01842-201ENST00000588275 RIPK3Q9Y572 518 aa20.06■□□□□ 0.8
LINC01842-201ENST00000588275 TRIM43BA6NCK2 446 aa20.05■□□□□ 0.8
LINC01842-201ENST00000588275 PQBP1O60828 265 aaKnown RBP20.05■□□□□ 0.8
LINC01842-201ENST00000588275 ZBED4O75132 1171 aa20.05■□□□□ 0.8
LINC01842-201ENST00000588275 PRPF38AQ8NAV1 312 aaKnown RBP20.05■□□□□ 0.8
LINC01842-201ENST00000588275 TRIM43Q96BQ3 446 aaPredicted RBP20.05■□□□□ 0.8
LINC01842-201ENST00000588275 GUCD1Q96NT3 240 aa20.05■□□□□ 0.8
LINC01842-201ENST00000588275 ZNF287Q9HBT7 754 aa20.05■□□□□ 0.8
LINC01842-201ENST00000588275 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
LINC01842-201ENST00000588275 LAMA2P24043 3122 aaKnown RBP20.05■□□□□ 0.8
LINC01842-201ENST00000588275 A0A1W2PQ45 241 aaPredicted RBP20.04■□□□□ 0.8
LINC01842-201ENST00000588275 A0A1W2PQY0 241 aa20.04■□□□□ 0.8
LINC01842-201ENST00000588275 POTEB2H3BUK9 544 aa20.04■□□□□ 0.8
LINC01842-201ENST00000588275 CLTBP09497 229 aa20.04■□□□□ 0.8
LINC01842-201ENST00000588275 CEP95Q96GE4 821 aa20.04■□□□□ 0.8
LINC01842-201ENST00000588275 IGKV6D-41A0A0C4DH26 115 aa20.03■□□□□ 0.8
LINC01842-201ENST00000588275 LRRFIP1Q32MZ4 808 aaKnown RBP20.03■□□□□ 0.8
LINC01842-201ENST00000588275 C1orf53Q5VUE5 145 aa20.03■□□□□ 0.8
LINC01842-201ENST00000588275 FAM109BQ6ICB4 259 aaPredicted RBP20.03■□□□□ 0.8
LINC01842-201ENST00000588275 IFNL3Q8IZI9 196 aa20.03■□□□□ 0.8
LINC01842-201ENST00000588275 CHMP4CQ96CF2 233 aa20.03■□□□□ 0.8
LINC01842-201ENST00000588275 SEC62Q99442 399 aaKnown RBP20.03■□□□□ 0.8
LINC01842-201ENST00000588275 SYNRGQ9UMZ2 1314 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 PATL2C9JE40 543 aaKnown RBP20.02■□□□□ 0.8
LINC01842-201ENST00000588275 TSPY3P0CV98 308 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 TSPY8P0CW00 308 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 FSD1Q9BTV5 496 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 NACAP1Q9BZK3 213 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 STARD7Q9NQZ5 370 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 MTMR4Q9NYA4 1195 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 TACC3Q9Y6A5 838 aa20.02■□□□□ 0.8
LINC01842-201ENST00000588275 SYNGAP1Q96PV0 1343 aa20.02■□□□□ 0.79
LINC01842-201ENST00000588275 A0A0C4DFX4 3053 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 ERC2O15083 957 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 ADAMTS4O75173 837 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 SNAI1O95863 264 aaPredicted RBP20.01■□□□□ 0.79
LINC01842-201ENST00000588275 TTLL1O95922 423 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 RAG1P15918 1043 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 PDE4BQ07343 736 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 MSL3Q8N5Y2 521 aaKnown RBP20.01■□□□□ 0.79
LINC01842-201ENST00000588275 NAPBQ9H115 298 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 HOMER2Q9NSB8 354 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 FEM1BQ9UK73 627 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 MCM3APO60318 1980 aa20.01■□□□□ 0.79
LINC01842-201ENST00000588275 SLC3A2P08195 630 aaKnown RBP20■□□□□ 0.79
LINC01842-201ENST00000588275 BMP3P12645 472 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 ITGB8P26012 769 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 ACLYP53396 1101 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 IKQ13123 557 aaPredicted RBP20■□□□□ 0.79
LINC01842-201ENST00000588275 SLFN13Q68D06 897 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
LINC01842-201ENST00000588275 SLC38A10Q9HBR0 1119 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 TMEM39AQ9NV64 488 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 TTC41PQ6P2S7 1318 aa20■□□□□ 0.79
LINC01842-201ENST00000588275 DNAJC25-GNG10A0A024R161 153 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 ATP2A1O14983 1001 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 MAMDC4Q6UXC1 1216 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 GMCL1P1Q8NEA9 526 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 NUP133Q8WUM0 1156 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 MKL1Q969V6 931 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 RNPC3Q96LT9 517 aaKnown RBP19.99■□□□□ 0.79
LINC01842-201ENST00000588275 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.99■□□□□ 0.79
LINC01842-201ENST00000588275 FBXO40Q9UH90 709 aa19.99■□□□□ 0.79
LINC01842-201ENST00000588275 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 TMEM232C9JQI7 657 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 C6orf222P0C671 652 aaPredicted RBP19.98■□□□□ 0.79
LINC01842-201ENST00000588275 TFAP4Q01664 338 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 PPARAQ07869 468 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 ACVR2BQ13705 512 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 KCNA10Q16322 511 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 CHST13Q8NET6 341 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 NEDD1Q8NHV4 660 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 PI4K2BQ8TCG2 481 aa19.98■□□□□ 0.79
LINC01842-201ENST00000588275 TSEN34Q9BSV6 310 aaKnown RBP19.98■□□□□ 0.79
LINC01842-201ENST00000588275 PLIN4Q96Q06 1357 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 CUL9Q8IWT3 2517 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 MOXD2PA6NHM9 499 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 KIAA0355O15063 1070 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 DUSP11O75319 330 aaKnown RBP19.97■□□□□ 0.79
LINC01842-201ENST00000588275 STAT2P52630 851 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 EPHB4P54760 987 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 IRX5P78411 483 aaPredicted RBP19.97■□□□□ 0.79
LINC01842-201ENST00000588275 FPGSQ05932 587 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 ARMCX2Q7L311 632 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 ZNF467Q7Z7K2 595 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms