RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ANKRD33BA6NCL7 494 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 C21orf2O43822 256 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 RPS6KA5O75582 802 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 CMA1P23946 247 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 KRT2P35908 639 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 IRX1P78414 480 aaPredicted RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 TYRO3Q06418 890 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 PKN1Q16512 942 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 SMARCE1Q969G3 411 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 CALR3Q96L12 384 aaKnown RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 ZDHHC15Q96MV8 337 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 GOLPH3LQ9H4A5 285 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 MRVI1Q9Y6F6 885 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 H0YHG0 523 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 ECE2O60344 883 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 ERCC3P19447 782 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 NOVP48745 357 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 SARNPP82979 210 aaKnown RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 SNW1Q13573 536 aaKnown RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 PPP2R5AQ15172 486 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 PTPAQ15257 358 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 CEP135Q66GS9 1140 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 CMTR1Q8N1G2 835 aaKnown RBP10.93□□□□□ -0.66
LINC01539-201ENST00000587904 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
LINC01539-201ENST00000587904 PSME4Q14997 1843 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 BTBD18B2RXH4 712 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 UBE2Q2LH0YL09 131 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 CUTAO60888 179 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 WDHD1O75717 1129 aaPredicted RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 BMP15O95972 392 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 SCG2P13521 617 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 CHRNA5P30532 468 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 ACTN2P35609 894 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 USP8P40818 1118 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 CAMK4Q16566 473 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 PFKFB3Q16875 520 aaPredicted RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 DACT2Q5SW24 774 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 SRBD1Q8N5C6 995 aaKnown RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 EHD4Q9H223 541 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 SH3GLB2Q9NR46 395 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 USP40Q9NVE5 1235 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 ZNF215Q9UL58 517 aaPredicted RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 KCNJ14Q9UNX9 436 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
LINC01539-201ENST00000587904 MYH8P13535 1937 aa10.92□□□□□ -0.66
LINC01539-201ENST00000587904 USP17L3A6NCW0 530 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 USP17L4A6NCW7 530 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 ZRANB2O95218 330 aaKnown RBP eCLIP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 CALML3P27482 149 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 CRKP46108 304 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 CORO7P57737 925 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 GABPAQ06546 454 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 ZRSR1Q15695 479 aaKnown RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 ELF2Q15723 593 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 SLC4A8Q2Y0W8 1093 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 USP17L1Q7RTZ2 530 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 SLC44A5Q8NCS7 719 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 BORCS6Q96GS4 357 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 C16orf45Q96MC5 204 aaPredicted RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 OSBPL5Q9H0X9 879 aaPredicted RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 DBNDD1Q9H9R9 158 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 SERPINA10Q9UK55 444 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 TPM1P09493 284 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 SMARCA1P28370 1054 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 E2F4Q16254 413 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 CCDC93Q567U6 631 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 APOBEC3HQ6NTF7 200 aaKnown RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 RTKN2Q8IZC4 609 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 VPS33BQ9H267 617 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 ARGLU1Q9NWB6 273 aaPredicted RBP10.91□□□□□ -0.66
LINC01539-201ENST00000587904 VPS54Q9P1Q0 977 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 STX8Q9UNK0 236 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 ADAMTSL1Q8N6G6 1762 aa10.91□□□□□ -0.66
LINC01539-201ENST00000587904 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 EIF3CLB5ME19 914 aaKnown RBP10.9□□□□□ -0.66
LINC01539-201ENST00000587904 STX1AQ16623 288 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 GALNT17Q6IS24 598 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 DEFB132Q7Z7B7 95 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 EFCAB13Q8IY85 973 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 CKAP2LQ8IYA6 745 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 KRI1Q8N9T8 703 aaKnown RBP10.9□□□□□ -0.66
LINC01539-201ENST00000587904 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 EIF3CQ99613 913 aaKnown RBP10.9□□□□□ -0.66
LINC01539-201ENST00000587904 SPZ1Q9BXG8 430 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 DHX36Q9H2U1 1008 aaKnown RBP10.9□□□□□ -0.66
LINC01539-201ENST00000587904 MAD2L2Q9UI95 211 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 SERPINB13Q9UIV8 391 aa10.9□□□□□ -0.66
LINC01539-201ENST00000587904 COL2A1P02458 1487 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms