RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 PRAMEF19Q5SWL8 479 aa23.71■■□□□ 1.39
TRAPPC6A-203ENST00000587818 RASGRP2Q7LDG7 609 aa23.71■■□□□ 1.39
TRAPPC6A-203ENST00000587818 CTDP1Q9Y5B0 961 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC6A-203ENST00000587818 HIP1O00291 1037 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 MNX1P50219 401 aaPredicted RBP23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 LHX8Q68G74 356 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SNRNP48Q6IEG0 339 aaKnown RBP23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 KCTD1Q719H9 257 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TBC1D10CQ8IV04 446 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 HTATIP2Q9BUP3 242 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 IL25Q9H293 177 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 OGDHLQ9ULD0 1010 aa23.7■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SLC1A4P43007 532 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SNAP25P60880 206 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 AKNAD1Q5T1N1 836 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 MFSD6Q6ZSS7 791 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 NECAB2Q7Z6G3 386 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ABRAQ8N0Z2 381 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SYNPO2Q9UMS6 1093 aa23.69■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ZNF213O14771 459 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 IGHA2P01877 340 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 IKQ13123 557 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 KCTD2Q14681 263 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 RCSD1Q6JBY9 416 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TEX13BQ9BXU2 312 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SLC38A10Q9HBR0 1119 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 SLC5A4Q9NY91 659 aa23.68■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ZMYM6O95789 1325 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 CAPN2P17655 700 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ANO1Q5XXA6 986 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 OLFML2BQ68BL8 750 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ANKLE1Q8NAG6 615 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 STAG1Q8WVM7 1258 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 GMCL1Q96IK5 515 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 MAML3Q96JK9 1138 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
TRAPPC6A-203ENST00000587818 NOVP48745 357 aa23.66■■□□□ 1.38
TRAPPC6A-203ENST00000587818 PPP4R3BQ5MIZ7 849 aa23.66■■□□□ 1.38
TRAPPC6A-203ENST00000587818 CHURC1Q8WUH1 139 aa23.66■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ZKSCAN3Q9BRR0 538 aa23.66■■□□□ 1.38
TRAPPC6A-203ENST00000587818 NEDD4P46934 1319 aa23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 CYBAP13498 195 aa23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 ZNF792Q3KQV3 632 aa23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TTBK2Q6IQ55 1244 aa23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TCP11L1Q9NUJ3 509 aa23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 DDX20Q9UHI6 824 aaKnown RBP23.65■■□□□ 1.38
TRAPPC6A-203ENST00000587818 TOP1P11387 765 aaKnown RBP23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 STAT2P52630 851 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CCDC96Q2M329 555 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 DDX11Q96FC9 970 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 AGBL1Q96MI9 1066 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 DSCC1Q9BVC3 393 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 C11orf49Q9H6J7 331 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 HOMER2Q9NSB8 354 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CEP290O15078 2479 aa23.64■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ZNF236Q9UL36 1845 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 SMCHD1A6NHR9 2005 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ATP2A1O14983 1001 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 EVI5O60447 810 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 COPB2P35606 906 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 SLC16A2P36021 539 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CCDC174Q6PII3 467 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 FAM160B2Q86V87 743 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 RNF41Q9H4P4 317 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 GPCPD1Q9NPB8 672 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PRR12Q9ULL5 1215 aa23.63■■□□□ 1.37
TRAPPC6A-203ENST00000587818 FRMPD2Q68DX3 1309 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PLXNA1Q9UIW2 1896 aa23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 TAL1P17542 331 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CHMLP26374 656 aa23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 SKAP1Q86WV1 359 aa23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 COLQQ9Y215 455 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ZNF536O15090 1300 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 B4E1Z4 1266 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 KDM4AO75164 1064 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 DCAF4Q8WV16 495 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ESR2Q92731 530 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 TINF2Q9BSI4 451 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 NR2E3Q9Y5X4 410 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ALPK3Q96L96 1907 aa23.61■■□□□ 1.37
TRAPPC6A-203ENST00000587818 MYCNP04198 464 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PCP11498 1178 aaKnown RBP23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 OAZ1P54368 228 aa23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 IMMTQ16891 758 aaKnown RBP23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ANKRD35Q8N283 1001 aa23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CTNNA3Q9UI47 895 aa23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 DIS3Q9Y2L1 958 aaKnown RBP23.6■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PFASO15067 1338 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PLA2G6O60733 806 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 FDX1P10109 184 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ALAS1P13196 640 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PTH1RQ03431 593 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 GJC2Q5T442 439 aaPredicted RBP23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 C7orf61Q8IZ16 206 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 CHST13Q8NET6 341 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 TTC14Q96N46 770 aa23.59■■□□□ 1.37
TRAPPC6A-203ENST00000587818 DNAJC25-GNG10A0A024R161 153 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 SEPT4O43236 478 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 HABP4Q5JVS0 413 aaKnown RBP23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 TRERF1Q96PN7 1200 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms