RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 KBTBD3Q8NAB2 608 aa16.82■□□□□ 0.28
DNMT1-213ENST00000587604 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
DNMT1-213ENST00000587604 NUP88Q99567 741 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-213ENST00000587604 CDX2Q99626 313 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-213ENST00000587604 RCAN3Q9UKA8 241 aa16.82■□□□□ 0.28
DNMT1-213ENST00000587604 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
DNMT1-213ENST00000587604 VCANP13611 3396 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 SYNGAP1Q96PV0 1343 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 A0A1W2PQ45 241 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-213ENST00000587604 A0A1W2PQY0 241 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 KIAA0355O15063 1070 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 ADAMTS4O75173 837 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 NDUFB10O96000 172 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 APPBP2Q92624 585 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 OSBP2Q969R2 916 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 CLIP2Q9UDT6 1046 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 FAM184BQ9ULE4 1060 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 RIPK3Q9Y572 518 aa16.81■□□□□ 0.28
DNMT1-213ENST00000587604 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
DNMT1-213ENST00000587604 PQBP1O60828 265 aaKnown RBP16.8■□□□□ 0.28
DNMT1-213ENST00000587604 ZBED4O75132 1171 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 SNAI1O95863 264 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-213ENST00000587604 RAG1P15918 1043 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 ZNF444Q8N0Y2 327 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-213ENST00000587604 KLHDC9Q8NEP7 349 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 NUP133Q8WUM0 1156 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 MKL1Q969V6 931 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 COL25A1Q9BXS0 654 aaPredicted RBP16.8■□□□□ 0.28
DNMT1-213ENST00000587604 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 EYSQ5T1H1 3165 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 MCM3APO60318 1980 aa16.8■□□□□ 0.28
DNMT1-213ENST00000587604 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 MOXD2PA6NHM9 499 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 ZFYP08048 801 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-213ENST00000587604 GNAT2P19087 354 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 ACLYP53396 1101 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 ZNF467Q7Z7K2 595 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-213ENST00000587604 CPXCR1Q8N123 301 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 LENG1Q96BZ8 264 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-213ENST00000587604 GPATCH3Q96I76 525 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 STARD7Q9NQZ5 370 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 TMEM39AQ9NV64 488 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 SYNPO2Q9UMS6 1093 aa16.79■□□□□ 0.28
DNMT1-213ENST00000587604 CTDP1Q9Y5B0 961 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-213ENST00000587604 PRUNE2Q8WUY3 3088 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 SYNRGQ9UMZ2 1314 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 DCDC2CA8MYV0 355 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 GPAA1O43292 621 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 DUSP11O75319 330 aaKnown RBP16.78■□□□□ 0.28
DNMT1-213ENST00000587604 TDO2P48775 406 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 EPHB4P54760 987 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 FAAP100Q0VG06 881 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 KCNA10Q16322 511 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 CCSAPQ6IQ19 270 aaPredicted RBP16.78■□□□□ 0.28
DNMT1-213ENST00000587604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.78■□□□□ 0.28
DNMT1-213ENST00000587604 RNPC3Q96LT9 517 aaKnown RBP16.78■□□□□ 0.28
DNMT1-213ENST00000587604 TTYH1Q9H313 450 aaPredicted RBP16.78■□□□□ 0.28
DNMT1-213ENST00000587604 DCTPP1Q9H773 170 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 SLC38A10Q9HBR0 1119 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 FEM1BQ9UK73 627 aa16.78■□□□□ 0.28
DNMT1-213ENST00000587604 PATL2C9JE40 543 aaKnown RBP16.77■□□□□ 0.28
DNMT1-213ENST00000587604 APPP05067 770 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 SLC4A3P48751 1232 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 FPGSQ05932 587 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 ACVR2BQ13705 512 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 CHST13Q8NET6 341 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 KIFC2Q96AC6 838 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 CEP95Q96GE4 821 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 ABHD16BQ9H3Z7 469 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 RAVER2Q9HCJ3 691 aaKnown RBP16.77■□□□□ 0.28
DNMT1-213ENST00000587604 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
DNMT1-213ENST00000587604 FBXO40Q9UH90 709 aa16.77■□□□□ 0.28
DNMT1-213ENST00000587604 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.28
DNMT1-213ENST00000587604 ELP1O95163 1332 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 PRDM1O75626 825 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 TTLL1O95922 423 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 CST5P28325 142 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-213ENST00000587604 OAZ1P54368 228 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 LRRFIP1Q32MZ4 808 aaKnown RBP16.76■□□□□ 0.27
DNMT1-213ENST00000587604 ANKRD35Q8N283 1001 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 PCSK9Q8NBP7 692 aaKnown RBP16.76■□□□□ 0.27
DNMT1-213ENST00000587604 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 MAFAQ8NHW3 353 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-213ENST00000587604 GLT1D1Q96MS3 346 aa16.76■□□□□ 0.27
DNMT1-213ENST00000587604 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.76■□□□□ 0.27
DNMT1-213ENST00000587604 M0R2C6 588 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 TIMP1P01033 207 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 FDX1P10109 184 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 TSHZ3Q63HK5 1081 aa16.75■□□□□ 0.27
DNMT1-213ENST00000587604 IFNL3Q8IZI9 196 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms