RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 PRAMEF19Q5SWL8 479 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 CHRDL2Q6WN34 429 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 MAML3Q96JK9 1138 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 SLC5A4Q9NY91 659 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 DDX20Q9UHI6 824 aaKnown RBP25.64■■□□□ 1.7
PKN1-210ENST00000587429 SYNPO2Q9UMS6 1093 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 RIPK3Q9Y572 518 aa25.64■■□□□ 1.7
PKN1-210ENST00000587429 PFASO15067 1338 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 BMP3P12645 472 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 SLC4A3P48751 1232 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 SNRNP48Q6IEG0 339 aaKnown RBP25.63■■□□□ 1.69
PKN1-210ENST00000587429 CPXCR1Q8N123 301 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 FEM1BQ9UK73 627 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 CCDC171Q6TFL3 1326 aa25.63■■□□□ 1.69
PKN1-210ENST00000587429 RANBP2P49792 3224 aaKnown RBP25.62■■□□□ 1.69
PKN1-210ENST00000587429 ORC4O43929 436 aa25.62■■□□□ 1.69
PKN1-210ENST00000587429 FGRP09769 529 aa25.62■■□□□ 1.69
PKN1-210ENST00000587429 HAND2P61296 217 aa25.62■■□□□ 1.69
PKN1-210ENST00000587429 TEX13BQ9BXU2 312 aa25.62■■□□□ 1.69
PKN1-210ENST00000587429 RAVER2Q9HCJ3 691 aaKnown RBP25.62■■□□□ 1.69
PKN1-210ENST00000587429 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
PKN1-210ENST00000587429 ZBED4O75132 1171 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 MCCP23508 829 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 KCTD2Q14681 263 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 RRP12Q5JTH9 1297 aaKnown RBP25.61■■□□□ 1.69
PKN1-210ENST00000587429 ANO1Q5XXA6 986 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 SLC38A10Q9HBR0 1119 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 TOMM22Q9NS69 142 aa25.61■■□□□ 1.69
PKN1-210ENST00000587429 ISY1Q9ULR0 285 aaKnown RBP25.61■■□□□ 1.69
PKN1-210ENST00000587429 TMEM232C9JQI7 657 aa25.6■■□□□ 1.69
PKN1-210ENST00000587429 COL6A1P12109 1028 aa25.6■■□□□ 1.69
PKN1-210ENST00000587429 ZNF792Q3KQV3 632 aa25.6■■□□□ 1.69
PKN1-210ENST00000587429 CWC27Q6UX04 472 aaKnown RBP25.6■■□□□ 1.69
PKN1-210ENST00000587429 RASGRP2Q7LDG7 609 aa25.6■■□□□ 1.69
PKN1-210ENST00000587429 C7orf61Q8IZ16 206 aa25.6■■□□□ 1.69
PKN1-210ENST00000587429 PDE4AP27815 886 aa25.59■■□□□ 1.69
PKN1-210ENST00000587429 COPB2P35606 906 aa25.59■■□□□ 1.69
PKN1-210ENST00000587429 RBM27Q9P2N5 1060 aaKnown RBP25.59■■□□□ 1.69
PKN1-210ENST00000587429 MTMR7Q9Y216 660 aa25.59■■□□□ 1.69
PKN1-210ENST00000587429 CTDP1Q9Y5B0 961 aaPredicted RBP25.59■■□□□ 1.69
PKN1-210ENST00000587429 DNAH12Q6ZR08 3092 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 ATP2A1O14983 1001 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 MSCO60682 206 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 SLC1A4P43007 532 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 KCTD1Q719H9 257 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 GMCL1Q96IK5 515 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 ZMYM6O95789 1325 aa25.58■■□□□ 1.69
PKN1-210ENST00000587429 NOVP48745 357 aa25.57■■□□□ 1.68
PKN1-210ENST00000587429 STAG1Q8WVM7 1258 aa25.57■■□□□ 1.68
PKN1-210ENST00000587429 DIAPH3Q9NSV4 1193 aa25.57■■□□□ 1.68
PKN1-210ENST00000587429 ZMYND8Q9ULU4 1186 aaPredicted RBP25.57■■□□□ 1.68
PKN1-210ENST00000587429 SEPT4O43236 478 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 TAL1P17542 331 aaPredicted RBP25.56■■□□□ 1.68
PKN1-210ENST00000587429 PPP4R3BQ5MIZ7 849 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 RCSD1Q6JBY9 416 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 TINF2Q9BSI4 451 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 PRO3102Q9H379 93 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 PCDH10Q9P2E7 1040 aa25.56■■□□□ 1.68
PKN1-210ENST00000587429 DIS3Q9Y2L1 958 aaKnown RBP25.56■■□□□ 1.68
PKN1-210ENST00000587429 MCM3APO60318 1980 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 FXR1P51114 621 aaKnown RBP eCLIP25.55■■□□□ 1.68
PKN1-210ENST00000587429 STAT2P52630 851 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 MFAP1P55081 439 aaKnown RBP25.55■■□□□ 1.68
PKN1-210ENST00000587429 SNAP25P60880 206 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 IKQ13123 557 aaPredicted RBP25.55■■□□□ 1.68
PKN1-210ENST00000587429 LRRC26Q2I0M4 334 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 GJC2Q5T442 439 aaPredicted RBP25.55■■□□□ 1.68
PKN1-210ENST00000587429 TBC1D10CQ8IV04 446 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 CHURC1Q8WUH1 139 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 DDX11Q96FC9 970 aa25.55■■□□□ 1.68
PKN1-210ENST00000587429 AKNAD1Q5T1N1 836 aa25.54■■□□□ 1.68
PKN1-210ENST00000587429 FAM160B2Q86V87 743 aa25.54■■□□□ 1.68
PKN1-210ENST00000587429 SENP6Q9GZR1 1112 aaPredicted RBP25.54■■□□□ 1.68
PKN1-210ENST00000587429 HOMER2Q9NSB8 354 aa25.54■■□□□ 1.68
PKN1-210ENST00000587429 DNAJC25-GNG10A0A024R161 153 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 SYN1P17600 705 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 MFSD6Q6ZSS7 791 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 AGBL1Q96MI9 1066 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 TMEM47Q9BQJ4 181 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 ZNF536O15090 1300 aa25.53■■□□□ 1.68
PKN1-210ENST00000587429 MYCNP04198 464 aaPredicted RBP25.52■■□□□ 1.68
PKN1-210ENST00000587429 GSPT1P15170 499 aaKnown RBP25.52■■□□□ 1.68
PKN1-210ENST00000587429 OAZ1P54368 228 aa25.52■■□□□ 1.68
PKN1-210ENST00000587429 TTBK2Q6IQ55 1244 aa25.52■■□□□ 1.68
PKN1-210ENST00000587429 TCP11L1Q9NUJ3 509 aa25.52■■□□□ 1.68
PKN1-210ENST00000587429 PRR12Q9ULL5 1215 aa25.52■■□□□ 1.68
PKN1-210ENST00000587429 HIP1O00291 1037 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 DNM1LO00429 736 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 PLA2G6O60733 806 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 ZNF865P0CJ78 1059 aaPredicted RBP25.51■■□□□ 1.67
PKN1-210ENST00000587429 FDX1P10109 184 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 CCDC96Q2M329 555 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.51■■□□□ 1.673e-7■■□□□ 13.6
PKN1-210ENST00000587429 ANKRD35Q8N283 1001 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 ARRDC4Q8NCT1 418 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 CHST13Q8NET6 341 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 IL25Q9H293 177 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 NEDD4P46934 1319 aa25.51■■□□□ 1.67
PKN1-210ENST00000587429 TOP1P11387 765 aaKnown RBP25.5■■□□□ 1.67
PKN1-210ENST00000587429 ATN1P54259 1190 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms