RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ADGRF4Q8IZF3 695 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 ZNF713Q8N859 430 aaPredicted RBP22.75■■□□□ 1.23
TRIM47-204ENST00000587339 GMCL1P1Q8NEA9 526 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 ENGASEQ8NFI3 743 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 SYT17Q9BSW7 474 aa22.75■■□□□ 1.23
TRIM47-204ENST00000587339 A0A1B0GVL5 298 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 F5H6K3 240 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 KINO60870 393 aaKnown RBP22.74■■□□□ 1.23
TRIM47-204ENST00000587339 CMA1P23946 247 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 KLRC3Q07444 240 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 DAGLBQ8NCG7 672 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 ZMYND12Q9H0C1 365 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 SCAF8Q9UPN6 1271 aaKnown RBP22.74■■□□□ 1.23
TRIM47-204ENST00000587339 H7C1D1 291 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 ADAMTS3O15072 1205 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 NOM1Q5C9Z4 860 aaKnown RBP22.74■■□□□ 1.23
TRIM47-204ENST00000587339 KRI1Q8N9T8 703 aaKnown RBP22.74■■□□□ 1.23
TRIM47-204ENST00000587339 JMJD4Q9H9V9 463 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 SYNPO2Q9UMS6 1093 aa22.74■■□□□ 1.23
TRIM47-204ENST00000587339 SLC16A2P36021 539 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 TRAPPC10P48553 1259 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 NDUFA8P51970 172 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 MAP3K10Q02779 954 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 GPC2Q8N158 579 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 RBSNQ9H1K0 784 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 HACL1Q9UJ83 578 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 ZBTB21Q9ULJ3 1066 aa22.73■■□□□ 1.23
TRIM47-204ENST00000587339 M0R2N6 131 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 CUTAO60888 179 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 GNA11P29992 359 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 FMR1NBQ8N0W7 255 aaPredicted RBP22.72■■□□□ 1.23
TRIM47-204ENST00000587339 GMCL1Q96IK5 515 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 ARHGEF10LQ9HCE6 1279 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 C6orf50Q9HD87 102 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 PNMA6FA0A0J9YX94 578 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 SMCO2A6NFE2 343 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 BMP15O95972 392 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 CAP2P40123 477 aa22.72■■□□□ 1.23
TRIM47-204ENST00000587339 ASTN2O75129 1339 aaPredicted RBP22.71■■□□□ 1.23
TRIM47-204ENST00000587339 CCDC194A0A1B0GVG4 234 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 A0A1W2PRG0 241 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 NDUFB10O96000 172 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 TTC38Q5R3I4 469 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 CKAP2LQ8IYA6 745 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 RASGRP4Q8TDF6 673 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 TEPSINQ96N21 525 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 CLIC6Q96NY7 704 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 PCDHA6Q9UN73 950 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 PCDHA8Q9Y5H6 950 aa22.71■■□□□ 1.23
TRIM47-204ENST00000587339 PFKFB1P16118 471 aa22.7■■□□□ 1.23
TRIM47-204ENST00000587339 PTPREP23469 700 aa22.7■■□□□ 1.23
TRIM47-204ENST00000587339 SHC4Q6S5L8 630 aa22.7■■□□□ 1.23
TRIM47-204ENST00000587339 RBM43Q6ZSC3 357 aaKnown RBP22.7■■□□□ 1.23
TRIM47-204ENST00000587339 GPRC5DQ9NZD1 345 aa22.7■■□□□ 1.23
TRIM47-204ENST00000587339 ESYT2A0FGR8 921 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 ZBTB5O15062 677 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 CTAGE5O15320 804 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 FUCA2Q9BTY2 467 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 DEFB129Q9H1M3 183 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 FBXO2Q9UK22 296 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-204ENST00000587339 MORC2Q9Y6X9 1032 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-204ENST00000587339 SRCAPQ6ZRS2 3230 aa22.7■■□□□ 1.22
TRIM47-204ENST00000587339 WNT7AO00755 349 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 CCDC192P0DO97 292 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 ECE1P42892 770 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 ZNF174Q15697 407 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 RESP18Q5W5W9 173 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 MTMR8Q96EF0 704 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 TMX2Q9Y320 296 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 SRPRBQ9Y5M8 271 aaKnown RBP22.69■■□□□ 1.22
TRIM47-204ENST00000587339 ASNSP08243 561 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 COA7Q96BR5 231 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 NUP88Q99567 741 aaPredicted RBP22.69■■□□□ 1.22
TRIM47-204ENST00000587339 PANK2Q9BZ23 570 aa22.69■■□□□ 1.22
TRIM47-204ENST00000587339 DICER1Q9UPY3 1922 aaKnown RBP22.68■■□□□ 1.22
TRIM47-204ENST00000587339 BMP3P12645 472 aa22.68■■□□□ 1.22
TRIM47-204ENST00000587339 ZNF202O95125 648 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 PPP1R18Q6NYC8 613 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 ZNF579Q8NAF0 562 aaKnown RBP22.67■■□□□ 1.22
TRIM47-204ENST00000587339 RNF214Q8ND24 703 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 ACER1Q8TDN7 264 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 SDF4Q9BRK5 362 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 GOPCQ9HD26 462 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 HPSEQ9Y251 543 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 FAM237AA0A1B0GTK4 181 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 PHF20L1A8MW92 1017 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 PPP1R11O60927 126 aaPredicted RBP22.67■■□□□ 1.22
TRIM47-204ENST00000587339 SYKP43405 635 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 IKQ13123 557 aaPredicted RBP22.67■■□□□ 1.22
TRIM47-204ENST00000587339 ANGEL2Q5VTE6 544 aaKnown RBP22.67■■□□□ 1.22
TRIM47-204ENST00000587339 KRT25Q7Z3Z0 450 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 SPICE1Q8N0Z3 855 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 SH2D4AQ9H788 454 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 MRVI1Q9Y6F6 885 aa22.67■■□□□ 1.22
TRIM47-204ENST00000587339 MCM7P33993 719 aa22.66■■□□□ 1.22
TRIM47-204ENST00000587339 GRIN1Q05586 938 aa22.66■■□□□ 1.22
TRIM47-204ENST00000587339 PTGDRQ13258 359 aa22.66■■□□□ 1.22
TRIM47-204ENST00000587339 APOBEC3FQ8IUX4 373 aaKnown RBP22.66■■□□□ 1.22
TRIM47-204ENST00000587339 REXO1Q8N1G1 1221 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms