RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 RLFQ13129 1914 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 KIF5BP33176 963 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 LBX1P52954 281 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 ERVK-9P63128 1117 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 ERVK-24P63145 666 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 APOA5Q6Q788 366 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 POTEEQ6S8J3 1075 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 SAMD1Q6SPF0 538 aaPredicted RBP22.36■■□□□ 1.17
DDX39A-204ENST00000586558 Q6ZUG5 572 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 ERO1AQ96HE7 468 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 TXNRD2Q9NNW7 524 aa22.36■■□□□ 1.17
DDX39A-204ENST00000586558 ZBED4O75132 1171 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 CCNA1P78396 465 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-204ENST00000586558 KIF22Q14807 665 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 SYDE2Q5VT97 1194 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 CTCFLQ8NI51 663 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-204ENST00000586558 BRF1Q92994 677 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 PDRG1Q9NUG6 133 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 CTDP1Q9Y5B0 961 aaPredicted RBP22.35■■□□□ 1.17
DDX39A-204ENST00000586558 PARP14Q460N5 1801 aa22.35■■□□□ 1.17
DDX39A-204ENST00000586558 PALM3A6NDB9 673 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-204ENST00000586558 ATP2A1O14983 1001 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 CNMDO75829 334 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 GOLGA8HP0CJ92 632 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 TTBK2Q6IQ55 1244 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 NUP133Q8WUM0 1156 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 ALDH8A1Q9H2A2 487 aaPredicted RBP22.34■■□□□ 1.17
DDX39A-204ENST00000586558 SLC38A10Q9HBR0 1119 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 PRDM10Q9NQV6 1147 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 BTBD7Q9P203 1132 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 MAD2L2Q9UI95 211 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 PRR12Q9ULL5 1215 aa22.34■■□□□ 1.17
DDX39A-204ENST00000586558 KLF18A0A0U1RQI7 1052 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 KLRF2D3W0D1 207 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 SLC16A2P36021 539 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 OAZ1P54368 228 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 REPS2Q8NFH8 660 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 TBC1D32Q96NH3 1257 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 BRPF3Q9ULD4 1205 aa22.33■■□□□ 1.17
DDX39A-204ENST00000586558 ZBTB43O43298 467 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 COPB2P35606 906 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 GNAQP50148 359 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 EVCP57679 992 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 TMEM132BQ14DG7 1078 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 PPP2R5BQ15173 497 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 ANKRD1Q15327 319 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 MICU3Q86XE3 530 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 IL27Q8NEV9 243 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 LZTS2Q9BRK4 669 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 MYL10Q9BUA6 226 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 TEX13BQ9BXU2 312 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 SPATC1LQ9H0A9 340 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 PNMA2Q9UL42 364 aa22.32■■□□□ 1.16
DDX39A-204ENST00000586558 ZNF214Q9UL59 606 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-204ENST00000586558 MAPK4P31152 587 aa22.31■■□□□ 1.16
DDX39A-204ENST00000586558 APOBRQ0VD83 1088 aa22.31■■□□□ 1.16
DDX39A-204ENST00000586558 TOB2Q14106 344 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-204ENST00000586558 STAG2Q8N3U4 1231 aa22.31■■□□□ 1.16
DDX39A-204ENST00000586558 FANCBQ8NB91 859 aa22.31■■□□□ 1.16
DDX39A-204ENST00000586558 SHCBP1Q8NEM2 672 aa22.31■■□□□ 1.16
DDX39A-204ENST00000586558 RANBP17Q9H2T7 1088 aaKnown RBP22.31■■□□□ 1.16
DDX39A-204ENST00000586558 GOLGA8BA8MQT2 603 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 SLC25A27O95847 323 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 GNRH1P01148 92 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 STAT3P40763 770 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 NEK4P51957 841 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 FCGRTP55899 365 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 PLS1Q14651 629 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 Q3C1V9 767 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 CCAR1Q8IX12 1150 aaKnown RBP22.3■■□□□ 1.16
DDX39A-204ENST00000586558 CD99L2Q8TCZ2 262 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 KIF2CQ99661 725 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 MOV10L1Q9BXT6 1211 aaKnown RBP22.3■■□□□ 1.16
DDX39A-204ENST00000586558 UBA5Q9GZZ9 404 aa22.3■■□□□ 1.16
DDX39A-204ENST00000586558 RBM28Q9NW13 759 aaKnown RBP22.3■■□□□ 1.16
DDX39A-204ENST00000586558 NID2Q14112 1375 aa22.29■■□□□ 1.16
DDX39A-204ENST00000586558 PEX10O60683 326 aa22.29■■□□□ 1.16
DDX39A-204ENST00000586558 SMARCA1P28370 1054 aa22.29■■□□□ 1.16
DDX39A-204ENST00000586558 RIOX2Q8IUF8 465 aa22.29■■□□□ 1.16
DDX39A-204ENST00000586558 ADGRF4Q8IZF3 695 aa22.29■■□□□ 1.16
DDX39A-204ENST00000586558 NAP1L2Q9ULW6 460 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-204ENST00000586558 CCDC196A0A1B0GTZ2 297 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 GOLGA8AA7E2F4 631 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
DDX39A-204ENST00000586558 RXRAP19793 462 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 PSMC4P43686 418 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 RABEP1Q15276 862 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 RTN1Q16799 776 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 SNRNP48Q6IEG0 339 aaKnown RBP22.28■■□□□ 1.16
DDX39A-204ENST00000586558 ZNF274Q96GC6 653 aaPredicted RBP22.28■■□□□ 1.16
DDX39A-204ENST00000586558 TRIM47Q96LD4 638 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 SPZ1Q9BXG8 430 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 PORCNQ9H237 461 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 MROH8Q9H579 483 aa22.28■■□□□ 1.16
DDX39A-204ENST00000586558 TNPO2O14787 897 aaKnown RBP22.27■■□□□ 1.16
DDX39A-204ENST00000586558 FMNL1O95466 1100 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-204ENST00000586558 ICAM1P05362 532 aa22.27■■□□□ 1.16
DDX39A-204ENST00000586558 METAP2P50579 478 aaKnown RBP eCLIP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms