RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PTPN18Q99952 460 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 ISY1Q9ULR0 285 aaKnown RBP19.73■□□□□ 0.75
PRKCSH-203ENST00000586486 WDR33Q9C0J8 1336 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 FLOT1O75955 427 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 TM4SF4P48230 202 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 KIF23Q02241 960 aaPredicted RBP19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 FUT2Q10981 343 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 GRM1Q13255 1194 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 SRBD1Q8N5C6 995 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 PRPF38AQ8NAV1 312 aaKnown RBP19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 RIOX1Q9H6W3 641 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 FBXO28Q9NVF7 368 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 PNMA3Q9UL41 463 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 PPP1R9AQ9ULJ8 1098 aa19.72■□□□□ 0.75
PRKCSH-203ENST00000586486 CNTNAP5Q8WYK1 1306 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 CPLX1O14810 134 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 IFNAR1P17181 557 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 MAP2K2P36507 400 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 VEGFBP49765 207 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 CUL4AQ13619 759 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 COG2Q14746 738 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 SLC35G1Q2M3R5 365 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 CPLX2Q6PUV4 134 aaKnown RBP19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 NBPF11Q86T75 865 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 FAM43AQ8N2R8 423 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 ZIC5Q96T25 663 aa19.71■□□□□ 0.75
PRKCSH-203ENST00000586486 PDHXO00330 501 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 IGF2BP3O00425 579 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 CYTH3O43739 400 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 CDKL5O76039 1030 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 OSBPP22059 807 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 SLC16A2P36021 539 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 ANP32AP39687 249 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 IRX3P78415 501 aaPredicted RBP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 IKQ13123 557 aaPredicted RBP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 LBX2Q6XYB7 198 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 IFNL1Q8IU54 200 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 CCDC83Q8IWF9 413 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 UBA5Q9GZZ9 404 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 ASCC2Q9H1I8 757 aaPredicted RBP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 PRR12Q9ULL5 1215 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 RBM19Q9Y4C8 960 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 MYH6P13533 1939 aa19.7■□□□□ 0.74
PRKCSH-203ENST00000586486 AOC2O75106 756 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 FDX1P10109 184 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 DSG3P32926 999 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 ADGRF4Q8IZF3 695 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 MTMR8Q96EF0 704 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 LLPHQ9BRT6 129 aaKnown RBP19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 CPVLQ9H3G5 476 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 HOXC10Q9NYD6 342 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 ADAMTS5Q9UNA0 930 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 COL11A1P12107 1806 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 SPDYE16A6NNV3 312 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 CTDNEP1O95476 244 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 BECN1Q14457 450 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 OTUD7BQ6GQQ9 843 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 CMTR1Q8N1G2 835 aaKnown RBP19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 KIFC2Q96AC6 838 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 RNF26Q9BY78 433 aaPredicted RBP19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 JMJD4Q9H9V9 463 aa19.69■□□□□ 0.74
PRKCSH-203ENST00000586486 NSUN7Q8NE18 718 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 GTF3C2Q8WUA4 911 aaPredicted RBP19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 PARK7Q99497 189 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 RANBP17Q9H2T7 1088 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 RBM27Q9P2N5 1060 aaKnown RBP19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 STK36Q9NRP7 1315 aa19.68■□□□□ 0.74
PRKCSH-203ENST00000586486 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
PRKCSH-203ENST00000586486 HERVK_113P62684 666 aa19.67■□□□□ 0.74
PRKCSH-203ENST00000586486 MB21D1Q8N884 522 aa19.67■□□□□ 0.74
PRKCSH-203ENST00000586486 ATG4CQ96DT6 458 aa19.67■□□□□ 0.74
PRKCSH-203ENST00000586486 SLC38A10Q9HBR0 1119 aa19.67■□□□□ 0.74
PRKCSH-203ENST00000586486 VWA5AO00534 786 aa19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 FMNL1O95466 1100 aaPredicted RBP19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 TRIM22Q8IYM9 498 aa19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 CCDC82Q8N4S0 544 aa19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 RRP36Q96EU6 259 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 INTS4Q96HW7 963 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 P2RX7Q99572 595 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-203ENST00000586486 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 ZBTB5O15062 677 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 PRPF3O43395 683 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 ALDH1A1P00352 501 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 CDC37Q16543 378 aaPredicted RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 REPS2Q8NFH8 660 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 PHKBQ93100 1093 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 CYP2C8P10632 490 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 SSRP1Q08945 709 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 PIGSQ96S52 555 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 SLC26A6Q9BXS9 759 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 SEC63Q9UGP8 760 aaKnown RBP19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 ADGRA2Q96PE1 1338 aa19.65■□□□□ 0.74
PRKCSH-203ENST00000586486 PNMA6FA0A0J9YX94 578 aa19.64■□□□□ 0.73
PRKCSH-203ENST00000586486 ATP2A1O14983 1001 aa19.64■□□□□ 0.73
PRKCSH-203ENST00000586486 ZBED4O75132 1171 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms