RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 RAG1P15918 1043 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 ADD2P35612 726 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 LBX2Q6XYB7 198 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 CATSPERGQ6ZRH7 1159 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 ZNF710Q8N1W2 664 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 NECAB3Q96P71 396 aaPredicted RBP11.14□□□□□ -0.63
SDF2-203ENST00000585749 PRDM12Q9H4Q4 367 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 PHF24Q9UPV7 400 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 MYO9BQ13459 2157 aa11.14□□□□□ -0.63
SDF2-203ENST00000585749 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
SDF2-203ENST00000585749 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
SDF2-203ENST00000585749 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 ADORA2AP29274 412 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 PBX2P40425 430 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 USP5P45974 858 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
SDF2-203ENST00000585749 DPP9Q86TI2 863 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 FOXP4Q8IVH2 680 aaPredicted RBP11.13□□□□□ -0.63
SDF2-203ENST00000585749 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 PBX4Q9BYU1 374 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
SDF2-203ENST00000585749 PALD1Q9ULE6 856 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 CHD7Q9P2D1 2997 aa11.13□□□□□ -0.63
SDF2-203ENST00000585749 A0A0G2JMZ2 1700 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 VCAM1P19320 739 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 UBE3CQ15386 1083 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
SDF2-203ENST00000585749 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 ZSCAN25Q6NSZ9 544 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 CRACR2BQ8N4Y2 399 aaPredicted RBP11.12□□□□□ -0.63
SDF2-203ENST00000585749 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
SDF2-203ENST00000585749 EHD4Q9H223 541 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
SDF2-203ENST00000585749 HCN4Q9Y3Q4 1203 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 PIEZO1Q92508 2521 aa11.12□□□□□ -0.63
SDF2-203ENST00000585749 SALL3Q9BXA9 1300 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 GRXCR1A8MXD5 290 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 ERC2O15083 957 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 PQBP1O60828 265 aaKnown RBP11.11□□□□□ -0.63
SDF2-203ENST00000585749 COBLO75128 1261 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 GH2P01242 217 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 BMP1P13497 986 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 MX1P20591 662 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 FAAP100Q0VG06 881 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 RASIP1Q5U651 963 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 TSHZ3Q63HK5 1081 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 TTC6Q86TZ1 520 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 PI4K2BQ8TCG2 481 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 FEZ1Q99689 392 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 LRFN3Q9BTN0 628 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 TMEM39AQ9NV64 488 aa11.11□□□□□ -0.63
SDF2-203ENST00000585749 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
SDF2-203ENST00000585749 SUPT16HQ9Y5B9 1047 aaKnown RBP11.11□□□□□ -0.63
SDF2-203ENST00000585749 GBF1Q92538 1859 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
SDF2-203ENST00000585749 A0A1W2PQ45 241 aaPredicted RBP11.1□□□□□ -0.63
SDF2-203ENST00000585749 A0A1W2PQY0 241 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 STRNO43815 780 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 MBD4O95243 580 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 USP14P54578 494 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 CCDC129Q6ZRS4 1044 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 C16orf59Q7L2K0 433 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 ANKRD33Q7Z3H0 272 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 SMC5Q8IY18 1101 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 EXOC6Q8TAG9 804 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 OTUD7AQ8TE49 926 aaPredicted RBP11.1□□□□□ -0.63
SDF2-203ENST00000585749 TOX2Q96NM4 488 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 MOV10L1Q9BXT6 1211 aaKnown RBP11.1□□□□□ -0.63
SDF2-203ENST00000585749 KIAA1683Q9H0B3 1180 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 ARMT1Q9H993 441 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 DCP1AQ9NPI6 582 aaPredicted RBP11.1□□□□□ -0.63
SDF2-203ENST00000585749 XPNPEP3Q9NQH7 507 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 SERPINB13Q9UIV8 391 aa11.1□□□□□ -0.63
SDF2-203ENST00000585749 MYH8P13535 1937 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 ROBO3Q96MS0 1386 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 PGK1P00558 417 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 TIMP1P01033 207 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 ZFYP08048 801 aaPredicted RBP11.09□□□□□ -0.63
SDF2-203ENST00000585749 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
SDF2-203ENST00000585749 ERCC3P19447 782 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 IGFBP4P22692 258 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 FOXK1P85037 733 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 DSG2Q14126 1118 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 LRRFIP1Q32MZ4 808 aaKnown RBP11.09□□□□□ -0.63
SDF2-203ENST00000585749 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 TMEM240Q5SV17 173 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 TATDN1Q6P1N9 297 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
SDF2-203ENST00000585749 ACER1Q8TDN7 264 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms