RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 ANO1Q5XXA6 986 aa27.41■■□□□ 1.98
LSM7-203ENST00000585409 C16orf86Q6ZW13 317 aa27.41■■□□□ 1.98
LSM7-203ENST00000585409 ATG4CQ96DT6 458 aa27.41■■□□□ 1.98
LSM7-203ENST00000585409 CCDC17Q96LX7 622 aa27.41■■□□□ 1.98
LSM7-203ENST00000585409 ROBO3Q96MS0 1386 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 SHHQ15465 462 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 VPS53Q5VIR6 699 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 CLEC10AQ8IUN9 316 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.4■■□□□ 1.98
LSM7-203ENST00000585409 DYNLL2Q96FJ2 89 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 MAML3Q96JK9 1138 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 COL25A1Q9BXS0 654 aaPredicted RBP27.4■■□□□ 1.98
LSM7-203ENST00000585409 MKNK2Q9HBH9 465 aa27.4■■□□□ 1.98
LSM7-203ENST00000585409 CYP2D7A0A087X1C5 515 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 SGSM2O43147 1006 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 FLOT1O75955 427 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 AKR1B1P15121 316 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 PPARAQ07869 468 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 PLS1Q14651 629 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 LRRC41Q15345 812 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 TRIM60Q495X7 471 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 PRAMEF19Q5SWL8 479 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 ZNF697Q5TEC3 545 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 NCAPG2Q86XI2 1143 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 FAM161BQ96MY7 647 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 VCPKMTQ9H867 229 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 ARHGEF10LQ9HCE6 1279 aa27.39■■□□□ 1.98
LSM7-203ENST00000585409 FGAP02671 866 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 CDK8P49336 464 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 ICA1Q05084 483 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 C9orf50Q5SZB4 431 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 SPICE1Q8N0Z3 855 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 SH2D4AQ9H788 454 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 PDLIM7Q9NR12 457 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 ADAMTS5Q9UNA0 930 aa27.38■■□□□ 1.97
LSM7-203ENST00000585409 EYSQ5T1H1 3165 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 FCER1AP12319 257 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 ADCYAP1R1P41586 468 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 FAM47AQ5JRC9 791 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 BADQ92934 168 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 NRBP1Q9UHY1 535 aa27.37■■□□□ 1.97
LSM7-203ENST00000585409 WDR46O15213 610 aaKnown RBP27.36■■□□□ 1.97
LSM7-203ENST00000585409 TMEM132BQ14DG7 1078 aa27.36■■□□□ 1.97
LSM7-203ENST00000585409 ESYT1Q9BSJ8 1104 aa27.36■■□□□ 1.97
LSM7-203ENST00000585409 PRDM5Q9NQX1 630 aaPredicted RBP27.36■■□□□ 1.97
LSM7-203ENST00000585409 ANAPC4Q9UJX5 808 aa27.36■■□□□ 1.97
LSM7-203ENST00000585409 TRIM43BA6NCK2 446 aa27.35■■□□□ 1.97
LSM7-203ENST00000585409 FOXP2O15409 715 aa27.35■■□□□ 1.97
LSM7-203ENST00000585409 SLC25A27O95847 323 aa27.35■■□□□ 1.97
LSM7-203ENST00000585409 PCP11498 1178 aaKnown RBP27.35■■□□□ 1.97
LSM7-203ENST00000585409 SH3RF1Q7Z6J0 888 aa27.35■■□□□ 1.97
LSM7-203ENST00000585409 ZNF444Q8N0Y2 327 aaPredicted RBP27.35■■□□□ 1.97
LSM7-203ENST00000585409 TRIM43Q96BQ3 446 aaPredicted RBP27.35■■□□□ 1.97
LSM7-203ENST00000585409 SMIM22K7EJ46 135 aa27.34■■□□□ 1.97
LSM7-203ENST00000585409 ZNF213O14771 459 aa27.34■■□□□ 1.97
LSM7-203ENST00000585409 MYCNP04198 464 aaPredicted RBP27.34■■□□□ 1.97
LSM7-203ENST00000585409 NT5C2P49902 561 aa27.34■■□□□ 1.97
LSM7-203ENST00000585409 IMMTQ16891 758 aaKnown RBP27.34■■□□□ 1.97
LSM7-203ENST00000585409 FERMT2Q96AC1 680 aa27.34■■□□□ 1.97
LSM7-203ENST00000585409 CDX2Q99626 313 aaPredicted RBP27.34■■□□□ 1.97
LSM7-203ENST00000585409 RNF41Q9H4P4 317 aaPredicted RBP27.34■■□□□ 1.97
LSM7-203ENST00000585409 PHF24Q9UPV7 400 aa27.34■■□□□ 1.97
LSM7-203ENST00000585409 U3KPZ7 1027 aaPredicted RBP27.34■■□□□ 1.97
LSM7-203ENST00000585409 GREB1LQ9C091 1923 aaPredicted RBP27.33■■□□□ 1.97
LSM7-203ENST00000585409 SMAD3P84022 425 aaKnown RBP27.32■■□□□ 1.96
LSM7-203ENST00000585409 RIOX2Q8IUF8 465 aa27.32■■□□□ 1.96
LSM7-203ENST00000585409 MMP19Q99542 508 aa27.32■■□□□ 1.96
LSM7-203ENST00000585409 SEMA6BQ9H3T3 888 aa27.32■■□□□ 1.96
LSM7-203ENST00000585409 XPNPEP3Q9NQH7 507 aa27.32■■□□□ 1.96
LSM7-203ENST00000585409 EIF5BO60841 1220 aaKnown RBP27.31■■□□□ 1.96
LSM7-203ENST00000585409 TLE2Q04725 743 aa27.31■■□□□ 1.96
LSM7-203ENST00000585409 PPP4R3BQ5MIZ7 849 aa27.31■■□□□ 1.96
LSM7-203ENST00000585409 STK11IPQ8N1F8 1099 aa27.31■■□□□ 1.96
LSM7-203ENST00000585409 DIS3Q9Y2L1 958 aaKnown RBP27.31■■□□□ 1.96
LSM7-203ENST00000585409 PGK2P07205 417 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 RARBP10826 455 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 EEF2P13639 858 aaKnown RBP27.3■■□□□ 1.96
LSM7-203ENST00000585409 ZNF792Q3KQV3 632 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 TINF2Q9BSI4 451 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 KANSL2Q9H9L4 492 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 FBXO28Q9NVF7 368 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 GTF3C3Q9Y5Q9 886 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 PRUNE2Q8WUY3 3088 aa27.3■■□□□ 1.96
LSM7-203ENST00000585409 CDH23Q9H251 3354 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 VWA5AO00534 786 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 ITGB8P26012 769 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 CTDSPL2Q05D32 466 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 SAMD1Q6SPF0 538 aaPredicted RBP27.29■■□□□ 1.96
LSM7-203ENST00000585409 MFSD6Q6ZSS7 791 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 REPS2Q8NFH8 660 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 IL25Q9H293 177 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 TTYH1Q9H313 450 aaPredicted RBP27.29■■□□□ 1.96
LSM7-203ENST00000585409 ANO2Q9NQ90 1003 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 TOMM22Q9NS69 142 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 ZNF214Q9UL59 606 aaPredicted RBP27.29■■□□□ 1.96
LSM7-203ENST00000585409 PPP1R9AQ9ULJ8 1098 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 TACC3Q9Y6A5 838 aa27.29■■□□□ 1.96
LSM7-203ENST00000585409 RASA1P20936 1047 aa27.28■■□□□ 1.96
LSM7-203ENST00000585409 KCTD2Q14681 263 aa27.28■■□□□ 1.96
LSM7-203ENST00000585409 RNF180Q86T96 592 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms