RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MSANTD4Q8NCY6 345 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SH3GLB2Q9NR46 395 aa16.01■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KIAA1551Q9HCM1 1747 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 H7C1D1 291 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CYP2D6P10635 497 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 USP5P45974 858 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ZCCHC17Q9NP64 241 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 GDAQ9Y2T3 454 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SPATA31A1Q5TZJ5 1347 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CHRM1P11229 460 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KRT9P35527 623 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 STAT6P42226 847 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 NAPGQ99747 312 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 DISC1Q9NRI5 854 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PCDHA4Q9UN74 947 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PRDX5P30044 214 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 UBXN1Q04323 297 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SLC10A5Q5PT55 438 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 WWC2Q6AWC2 1192 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ADSSL1Q8N142 457 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MAPK8IP1Q9UQF2 711 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 HIBADHP31937 336 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 WHAMMP3Q1A5X7 153 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 BEND6Q5SZJ8 279 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CALCOCO1Q9P1Z2 691 aa15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ROBO1Q9Y6N7 1651 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 M0R2N6 131 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PARP1P09874 1014 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PNKPQ96T60 521 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KCNB1Q14721 858 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 GPKOWQ92917 476 aaPredicted RBP eCLIP15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SLF1Q9BQI6 1058 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 IL17RBQ9NRM6 502 aa15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 EPN1Q9Y6I3 576 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MYL1P05976 194 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 NT5C2P49902 561 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 DTHD1Q6ZMT9 781 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ANKS1AQ92625 1134 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SMARCC1Q92922 1105 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CHP1Q99653 195 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 A0A1W2PQC6 194 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 LGALS16A8MUM7 142 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 NDUFA10O95299 355 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 EEF1GP26641 437 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ST5P78524 1137 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 AMPD2Q01433 879 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TFAP4Q01664 338 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 SEMA3FQ13275 785 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TYW1BQ6NUM6 668 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MAST2Q6P0Q8 1798 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 STAG2Q8N3U4 1231 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MSL3Q8N5Y2 521 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MB21D1Q8N884 522 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 OR8K1Q8NGG5 319 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 REXO2Q9Y3B8 237 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CCDC194A0A1B0GVG4 234 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CTAGE15A4D2H0 777 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ERLIN1O75477 346 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 TFRCP02786 760 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CTAGE8P0CG41 777 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 PMS1P54277 932 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CTAGE6Q86UF2 777 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CTAGE4Q8IX94 777 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 ZNF507Q8TCN5 953 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 DNAJC7Q99615 494 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 CCDC88AQ3V6T2 1871 aa15.96■□□□□ 0.15
CDK5RAP3-237ENST00000585163 KLRC4O43908 158 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 USP17L8P0C7I0 530 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GRM4Q14833 912 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 HDXQ7Z353 690 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 TXLNBQ8N3L3 684 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 DAGLBQ8NCG7 672 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 CCSER1Q9C0I3 900 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 THAP9Q9H5L6 903 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 KBTBD4Q9NVX7 518 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 L1RE1Q9UN81 338 aa15.96■□□□□ 0.14
CDK5RAP3-237ENST00000585163 H3BQF6 201 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 RHOBTB3O94955 611 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GNAQP50148 359 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GPS2Q13227 327 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 C12orf60Q5U649 245 aa15.95■□□□□ 0.14
CDK5RAP3-237ENST00000585163 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms