RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SASH1O94885 1247 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 KCNA6P17658 529 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 MFSD4AQ8N468 514 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 NECAB3Q96P71 396 aaPredicted RBP2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 WDR18Q9BV38 432 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 TRPC5Q9UL62 973 aaPredicted RBP2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 SLIT2O94813 1529 aa2.65□□□□□ -1.98
SMCHD1-211ENST00000584897 KANK1Q14678 1352 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 CEP152O94986 1710 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 SEMA7AO75326 666 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 HSPA6P17066 643 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 NAALADL2Q58DX5 795 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 ABI1Q8IZP0 508 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 ABHD4Q8TB40 342 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 CAPN10Q9HC96 672 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 CWC22Q9HCG8 908 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 ZC3H7BQ9UGR2 993 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 PIK3C2BO00750 1634 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 CST3P01034 146 aaPredicted RBP2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 ENOX2Q16206 610 aaKnown RBP2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 MSMPQ1L6U9 139 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 ZNF423Q2M1K9 1284 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 IRF2BP1Q8IU81 584 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 NPHS2Q9NP85 383 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 PIK3R4Q99570 1358 aa2.65□□□□□ -1.99
SMCHD1-211ENST00000584897 A0A1W2PQJ5 194 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 FITM1A5D6W6 292 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 FAM170BA6NMN3 283 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ADAM11O75078 769 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 GTF2F1P35269 517 aaKnown RBP eCLIP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 RGS19P49795 217 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 MEX3CQ5U5Q3 659 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 FAM177A1Q8N128 213 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 UBXN4Q92575 508 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 WNT10AQ9GZT5 417 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 C12orf49Q9H741 205 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 CCDC87Q9NVE4 849 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 R3HCC1Q9Y3T6 440 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ADCY9O60503 1353 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ZBTB39O15060 712 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 PRPF40AO75400 957 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ATP2B1P20020 1258 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 IBSPP21815 317 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 MLANAQ16655 118 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ANKS4BQ8N8V4 417 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ASPNQ9BXN1 380 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 SEMA6CQ9H3T2 930 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ANKRD30AQ9BXX3 1397 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 P4HBP07237 508 aaKnown RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 IMPDH2P12268 514 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 DCP1AQ9NPI6 582 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 PAK6Q9NQU5 681 aaPredicted RBP2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 C10orf71Q711Q0 1435 aa2.64□□□□□ -1.99
SMCHD1-211ENST00000584897 ANKRD62A6NC57 917 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TM4SF5O14894 197 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 GPR182O15218 404 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 LDHBP07195 334 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 NOP2P46087 812 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TTLL4Q14679 1199 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 C9orf131Q5VYM1 1079 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TTC6Q86TZ1 520 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 PMFBP1Q8TBY8 1022 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 MYLIPQ8WY64 445 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TMA7Q9Y2S6 64 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 ADAMTS7Q9UKP4 1686 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 LTKP29376 864 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 DNAJA1P31689 397 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 GRM2Q14416 872 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 DNAJC5GQ8N7S2 189 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 DHRS1Q96LJ7 313 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 SPATA32Q96LK8 384 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 MIPEPQ99797 713 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 CCDC86Q9H6F5 360 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 SMARCA5O60264 1052 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TSPY4P0CV99 314 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 TSPY10P0CW01 314 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 DRD2P14416 443 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 ITIH2P19823 946 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 MAP1SQ66K74 1059 aaPredicted RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 RNF111Q6ZNA4 994 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 DBX2Q6ZNG2 339 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 ZNF765Q7L2R6 523 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 CABP7Q86V35 215 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 ANKRD13AQ8IZ07 590 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 KCNN1Q92952 543 aa2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 NOC4LQ9BVI4 516 aaKnown RBP2.63□□□□□ -1.99
SMCHD1-211ENST00000584897 SCAMP3O14828 347 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SORBS3O60504 671 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 SRFP11831 508 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GNA15P30679 374 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GBP1P32455 592 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 MTMR3Q13615 1198 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 ZC3H12AQ5D1E8 599 aaKnown RBP2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 ALPK1Q96QP1 1244 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 TNKS2Q9H2K2 1166 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 GCC2Q8IWJ2 1684 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 TULP4Q9NRJ4 1543 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 MST1RQ04912 1400 aa2.62□□□□□ -1.99
SMCHD1-211ENST00000584897 IQGAP3Q86VI3 1631 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms