RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 TLE2Q04725 743 aa27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 C9orf50Q5SZB4 431 aa27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 TRIM43Q96BQ3 446 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 LENG1Q96BZ8 264 aaPredicted RBP27.46■■□□□ 1.99
TRAPPC8-213ENST00000584876 ZFYP08048 801 aaPredicted RBP27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 GNAT2P19087 354 aa27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 ZNF697Q5TEC3 545 aa27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 PRPF38AQ8NAV1 312 aaKnown RBP27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 DCTPP1Q9H773 170 aa27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 CLIP2Q9UDT6 1046 aa27.45■■□□□ 1.98
TRAPPC8-213ENST00000584876 CUL9Q8IWT3 2517 aa27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 IGKV6D-41A0A0C4DH26 115 aa27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 MSL3Q8N5Y2 521 aaKnown RBP27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 DDX11Q96FC9 970 aa27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 ZNF287Q9HBT7 754 aa27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 RIPK3Q9Y572 518 aa27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 CTDP1Q9Y5B0 961 aaPredicted RBP27.44■■□□□ 1.98
TRAPPC8-213ENST00000584876 A0A1W2PQ45 241 aaPredicted RBP27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 A0A1W2PQY0 241 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 M0R2C6 588 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 PRDM1O75626 825 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 APPP05067 770 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 CLTBP09497 229 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 SLC4A3P48751 1232 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 ZNF444Q8N0Y2 327 aaPredicted RBP27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 TACC3Q9Y6A5 838 aa27.43■■□□□ 1.98
TRAPPC8-213ENST00000584876 SYNGAP1Q96PV0 1343 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 ZBED4O75132 1171 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 ADAMTS4O75173 837 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 CPXCR1Q8N123 301 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 KIFC2Q96AC6 838 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 CEP95Q96GE4 821 aa27.42■■□□□ 1.98
TRAPPC8-213ENST00000584876 ATP2A1O14983 1001 aa27.41■■□□□ 1.98
TRAPPC8-213ENST00000584876 ZHX1Q9UKY1 873 aaPredicted RBP27.41■■□□□ 1.98
TRAPPC8-213ENST00000584876 UNC80Q8N2C7 3258 aa27.41■■□□□ 1.98
TRAPPC8-213ENST00000584876 SYNRGQ9UMZ2 1314 aa27.41■■□□□ 1.98
TRAPPC8-213ENST00000584876 DNAJC25-GNG10A0A024R161 153 aa27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 PQBP1O60828 265 aaKnown RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 SNAI1O95863 264 aaPredicted RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 LRRFIP1Q32MZ4 808 aaKnown RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 MAMDC4Q6UXC1 1216 aa27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 LRRC47Q8N1G4 583 aaKnown RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 TSEN34Q9BSV6 310 aaKnown RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 RAVER2Q9HCJ3 691 aaKnown RBP27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 MTMR4Q9NYA4 1195 aa27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 FAM184BQ9ULE4 1060 aa27.4■■□□□ 1.98
TRAPPC8-213ENST00000584876 PATL2C9JE40 543 aaKnown RBP27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 ITGB8P26012 769 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 IFNL3Q8IZI9 196 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 MKL1Q969V6 931 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 SLC38A10Q9HBR0 1119 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 FEM1BQ9UK73 627 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 SYNPO2Q9UMS6 1093 aa27.39■■□□□ 1.98
TRAPPC8-213ENST00000584876 PLIN4Q96Q06 1357 aa27.38■■□□□ 1.97
TRAPPC8-213ENST00000584876 TTLL1O95922 423 aa27.38■■□□□ 1.97
TRAPPC8-213ENST00000584876 ZNF467Q7Z7K2 595 aaPredicted RBP27.38■■□□□ 1.97
TRAPPC8-213ENST00000584876 NACAP1Q9BZK3 213 aa27.38■■□□□ 1.97
TRAPPC8-213ENST00000584876 STARD7Q9NQZ5 370 aa27.38■■□□□ 1.97
TRAPPC8-213ENST00000584876 KIAA0355O15063 1070 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 RAG1P15918 1043 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 ACLYP53396 1101 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 SMAD3P84022 425 aaKnown RBP27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 ANKRD35Q8N283 1001 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 GMCL1P1Q8NEA9 526 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 NUP133Q8WUM0 1156 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 FBXO40Q9UH90 709 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 TTC41PQ6P2S7 1318 aa27.37■■□□□ 1.97
TRAPPC8-213ENST00000584876 MOXD2PA6NHM9 499 aa27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 TSPY3P0CV98 308 aa27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 TSPY8P0CW00 308 aa27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 KLHDC9Q8NEP7 349 aa27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 SEC62Q99442 399 aaKnown RBP27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 TMEM39AQ9NV64 488 aa27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.36■■□□□ 1.97
TRAPPC8-213ENST00000584876 ERC2O15083 957 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 DUSP11O75319 330 aaKnown RBP27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 BMP3P12645 472 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 OAZ1P54368 228 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 PDE4BQ07343 736 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 ACVR2BQ13705 512 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 KCNA10Q16322 511 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 SLFN13Q68D06 897 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 CHST13Q8NET6 341 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 NEDD1Q8NHV4 660 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 RNPC3Q96LT9 517 aaKnown RBP27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 CDX2Q99626 313 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 SEMA6BQ9H3T3 888 aa27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 ISY1Q9ULR0 285 aaKnown RBP27.35■■□□□ 1.97
TRAPPC8-213ENST00000584876 MYADML2A6NDP7 307 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 EPHB4P54760 987 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 ANKRD33Q7Z3H0 272 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 FGD4Q96M96 766 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 TOX2Q96NM4 488 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 FSD1Q9BTV5 496 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 NAPBQ9H115 298 aa27.34■■□□□ 1.97
TRAPPC8-213ENST00000584876 DCDC2CA8MYV0 355 aa27.33■■□□□ 1.97
TRAPPC8-213ENST00000584876 SLC3A2P08195 630 aaKnown RBP27.33■■□□□ 1.97
TRAPPC8-213ENST00000584876 FPGSQ05932 587 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms