RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PRAMEF19Q5SWL8 479 aa21.35■■□□□ 1.01
SRSF1-208ENST00000584773 SNRNP48Q6IEG0 339 aaKnown RBP21.35■■□□□ 1.01
SRSF1-208ENST00000584773 TBC1D10CQ8IV04 446 aa21.35■■□□□ 1.01
SRSF1-208ENST00000584773 ANKLE1Q8NAG6 615 aa21.35■■□□□ 1.01
SRSF1-208ENST00000584773 RAVER2Q9HCJ3 691 aaKnown RBP21.35■■□□□ 1.01
SRSF1-208ENST00000584773 COLQQ9Y215 455 aaPredicted RBP21.35■■□□□ 1.01
SRSF1-208ENST00000584773 PFASO15067 1338 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 ORC4O43929 436 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 FGRP09769 529 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 BMP3P12645 472 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
SRSF1-208ENST00000584773 MCCP23508 829 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 ANO1Q5XXA6 986 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 OLFML2BQ68BL8 750 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 ABRAQ8N0Z2 381 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 PRPF38AQ8NAV1 312 aaKnown RBP21.34■■□□□ 1.01
SRSF1-208ENST00000584773 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 IL25Q9H293 177 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 C11orf49Q9H6J7 331 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 DIAPH3Q9NSV4 1193 aa21.34■■□□□ 1.01
SRSF1-208ENST00000584773 ZMYM6O95789 1325 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 TMEM232C9JQI7 657 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 HABP4Q5JVS0 413 aaKnown RBP21.33■■□□□ 1.01
SRSF1-208ENST00000584773 KCTD1Q719H9 257 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 TICAM2Q86XR7 235 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 TEX13BQ9BXU2 312 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 DDX20Q9UHI6 824 aaKnown RBP21.33■■□□□ 1.01
SRSF1-208ENST00000584773 FEM1BQ9UK73 627 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 SYNPO2Q9UMS6 1093 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 LAMA4Q16363 1823 aa21.33■■□□□ 1.01
SRSF1-208ENST00000584773 EVI5O60447 810 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 CAPN2P17655 700 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 SNAP25P60880 206 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 KCTD2Q14681 263 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 CHRDL2Q6WN34 429 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 SLC38A10Q9HBR0 1119 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 NEDD4P46934 1319 aa21.32■■□□□ 1
SRSF1-208ENST00000584773 ZBED4O75132 1171 aa21.31■■□□□ 1
SRSF1-208ENST00000584773 SLC34A2O95436 690 aa21.31■■□□□ 1
SRSF1-208ENST00000584773 SLC1A4P43007 532 aa21.31■■□□□ 1
SRSF1-208ENST00000584773 ZNF792Q3KQV3 632 aa21.31■■□□□ 1
SRSF1-208ENST00000584773 GMCL1Q96IK5 515 aa21.31■■□□□ 1
SRSF1-208ENST00000584773 TAL1P17542 331 aaPredicted RBP21.3■■□□□ 1
SRSF1-208ENST00000584773 NOVP48745 357 aa21.3■■□□□ 1
SRSF1-208ENST00000584773 IKQ13123 557 aaPredicted RBP21.3■■□□□ 1
SRSF1-208ENST00000584773 TTC22Q5TAA0 569 aa21.3■■□□□ 1
SRSF1-208ENST00000584773 C7orf61Q8IZ16 206 aa21.3■■□□□ 1
SRSF1-208ENST00000584773 SLC5A4Q9NY91 659 aa21.3■■□□□ 1
SRSF1-208ENST00000584773 CTDP1Q9Y5B0 961 aaPredicted RBP21.3■■□□□ 1
SRSF1-208ENST00000584773 SMCHD1A6NHR9 2005 aa21.3■■□□□ 1
SRSF1-208ENST00000584773 COL6A1P12109 1028 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 STAT2P52630 851 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 AKNAD1Q5T1N1 836 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 STAG1Q8WVM7 1258 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 HOMER2Q9NSB8 354 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 TRIOBPQ9H2D6 2365 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 ATP2A1O14983 1001 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 COPB2P35606 906 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 MFAP1P55081 439 aaKnown RBP21.29■■□□□ 1
SRSF1-208ENST00000584773 TMEM47Q9BQJ4 181 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 ZMYND8Q9ULU4 1186 aaPredicted RBP21.29■■□□□ 1
SRSF1-208ENST00000584773 NR2E3Q9Y5X4 410 aa21.29■■□□□ 1
SRSF1-208ENST00000584773 ZNF536O15090 1300 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 RANBP2P49792 3224 aaKnown RBP21.28■■□□□ 1
SRSF1-208ENST00000584773 MCM3APO60318 1980 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 CCDC96Q2M329 555 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 TTBK2Q6IQ55 1244 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 RCSD1Q6JBY9 416 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 CCDC174Q6PII3 467 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 MFSD6Q6ZSS7 791 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 AGBL1Q96MI9 1066 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 ZKSCAN3Q9BRR0 538 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 TINF2Q9BSI4 451 aa21.28■■□□□ 1
SRSF1-208ENST00000584773 FRMPD2Q68DX3 1309 aaPredicted RBP21.27■■□□□ 1
SRSF1-208ENST00000584773 HIP1O00291 1037 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 SEPT4O43236 478 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 SLC16A2P36021 539 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 LRRC26Q2I0M4 334 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 PPP4R3BQ5MIZ7 849 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 GJC2Q5T442 439 aaPredicted RBP21.27■□□□□ 0.99
SRSF1-208ENST00000584773 FAM160B2Q86V87 743 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 LENG1Q96BZ8 264 aaPredicted RBP21.27■□□□□ 0.99
SRSF1-208ENST00000584773 DDX11Q96FC9 970 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 RBM27Q9P2N5 1060 aaKnown RBP21.27■□□□□ 0.99
SRSF1-208ENST00000584773 PRR12Q9ULL5 1215 aa21.27■□□□□ 0.99
SRSF1-208ENST00000584773 DNAJC25-GNG10A0A024R161 153 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 ZNF213O14771 459 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 MSCO60682 206 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 MYCNP04198 464 aaPredicted RBP21.26■□□□□ 0.99
SRSF1-208ENST00000584773 SYN1P17600 705 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 CHURC1Q8WUH1 139 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 FGD4Q96M96 766 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 SENP6Q9GZR1 1112 aaPredicted RBP21.26■□□□□ 0.99
SRSF1-208ENST00000584773 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
SRSF1-208ENST00000584773 TOP1P11387 765 aaKnown RBP21.25■□□□□ 0.99
SRSF1-208ENST00000584773 OAZ1P54368 228 aa21.25■□□□□ 0.99
SRSF1-208ENST00000584773 DCAF4Q8WV16 495 aa21.25■□□□□ 0.99
SRSF1-208ENST00000584773 DSCC1Q9BVC3 393 aa21.25■□□□□ 0.99
SRSF1-208ENST00000584773 GPCPD1Q9NPB8 672 aa21.25■□□□□ 0.99
SRSF1-208ENST00000584773 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms