RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 IL17RBQ9NRM6 502 aa15.77■□□□□ 0.12
SREBF1-223ENST00000584760 SLC15A5A6NIM6 579 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 NMT2O60551 498 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 PTPREP23469 700 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 RGS2P41220 211 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 NOVP48745 357 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 HAND2P61296 217 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 WDR78Q5VTH9 848 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 TBC1D10CQ8IV04 446 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 REPS2Q8NFH8 660 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 COL25A1Q9BXS0 654 aaPredicted RBP15.76■□□□□ 0.11
SREBF1-223ENST00000584760 CWC22Q9HCG8 908 aaKnown RBP15.76■□□□□ 0.11
SREBF1-223ENST00000584760 A0A0C4DFX4 3053 aa15.76■□□□□ 0.11
SREBF1-223ENST00000584760 VWA5AO00534 786 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
SREBF1-223ENST00000584760 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
SREBF1-223ENST00000584760 ERCC3P19447 782 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 PPP4R3BQ5MIZ7 849 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-223ENST00000584760 STAG1Q8WVM7 1258 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 FAM161BQ96MY7 647 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 SLF1Q9BQI6 1058 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 DSCC1Q9BVC3 393 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 ZNF214Q9UL59 606 aaPredicted RBP15.75■□□□□ 0.11
SREBF1-223ENST00000584760 IVNS1ABPQ9Y6Y0 642 aa15.75■□□□□ 0.11
SREBF1-223ENST00000584760 RAD50Q92878 1312 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 HOXC6P09630 235 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 PLS1Q14651 629 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 AKNAD1Q5T1N1 836 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.74■□□□□ 0.11
SREBF1-223ENST00000584760 LBHD1Q9BQE6 289 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-223ENST00000584760 SENP6Q9GZR1 1112 aaPredicted RBP15.74■□□□□ 0.11
SREBF1-223ENST00000584760 MROH8Q9H579 483 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 STX8Q9UNK0 236 aa15.74■□□□□ 0.11
SREBF1-223ENST00000584760 NEDD4P46934 1319 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 RRP12Q5JTH9 1297 aaKnown RBP15.73■□□□□ 0.11
SREBF1-223ENST00000584760 SLFN13Q68D06 897 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 RIOX2Q8IUF8 465 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 GMCL1Q96IK5 515 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 TOMM22Q9NS69 142 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 CUL9Q8IWT3 2517 aa15.73■□□□□ 0.11
SREBF1-223ENST00000584760 STRNO43815 780 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 SLC25A27O95847 323 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 IGHA2P01877 340 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 BMP3P12645 472 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 CHMLP26374 656 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 ADORA2AP29274 412 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 CNGA1P29973 690 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 ATN1P54259 1190 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-223ENST00000584760 MFSD14CQ5VZR4 134 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 MFSD6Q6ZSS7 791 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-223ENST00000584760 RASGRP2Q7LDG7 609 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 NCAPG2Q86XI2 1143 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 ABRAQ8N0Z2 381 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 PRPF38AQ8NAV1 312 aaKnown RBP15.72■□□□□ 0.11
SREBF1-223ENST00000584760 NPLOC4Q8TAT6 608 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 GUCD1Q96NT3 240 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
SREBF1-223ENST00000584760 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 FLRT1Q9NZU1 646 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 FEM1BQ9UK73 627 aa15.72■□□□□ 0.11
SREBF1-223ENST00000584760 ZNF213O14771 459 aa15.71■□□□□ 0.11
SREBF1-223ENST00000584760 FAM109BQ6ICB4 259 aaPredicted RBP15.71■□□□□ 0.11
SREBF1-223ENST00000584760 TEX13BQ9BXU2 312 aa15.71■□□□□ 0.11
SREBF1-223ENST00000584760 SLC38A10Q9HBR0 1119 aa15.71■□□□□ 0.11
SREBF1-223ENST00000584760 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 COPB2P35606 906 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 STAT3P40763 770 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 SLC1A4P43007 532 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 STAT2P52630 851 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 RCSD1Q6JBY9 416 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
SREBF1-223ENST00000584760 MCM3APO60318 1980 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 LCTP09848 1927 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 COBLO75128 1261 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 TOP1P11387 765 aaKnown RBP15.69■□□□□ 0.1
SREBF1-223ENST00000584760 FCER1AP12319 257 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 MCCP23508 829 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 NT5C2P49902 561 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 IMMTQ16891 758 aaKnown RBP15.69■□□□□ 0.1
SREBF1-223ENST00000584760 SNRNP48Q6IEG0 339 aaKnown RBP15.69■□□□□ 0.1
SREBF1-223ENST00000584760 DPP9Q86TI2 863 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 RUFY2Q8WXA3 655 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 ESR2Q92731 530 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 TMEM47Q9BQJ4 181 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 PRKAG2Q9UGJ0 569 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
SREBF1-223ENST00000584760 CTNNA3Q9UI47 895 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 RIPK3Q9Y572 518 aa15.69■□□□□ 0.1
SREBF1-223ENST00000584760 TMEM232C9JQI7 657 aa15.68■□□□□ 0.1
SREBF1-223ENST00000584760 SGSM2O43147 1006 aa15.68■□□□□ 0.1
SREBF1-223ENST00000584760 PLA2G6O60733 806 aa15.68■□□□□ 0.1
SREBF1-223ENST00000584760 CYP2C19P33261 490 aa15.68■□□□□ 0.1
SREBF1-223ENST00000584760 OAZ1P54368 228 aa15.68■□□□□ 0.1
SREBF1-223ENST00000584760 ZNF697Q5TEC3 545 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms