RNA–Protein interactions for RNA: ENST00000584328.1

NF1-223, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-223ENST00000584328 ROCK1Q13464 1354 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 DHX29Q7Z478 1369 aaKnown RBP7.66□□□□□ -1.18
NF1-223ENST00000584328 BCORL1Q5H9F3 1711 aa7.66□□□□□ -1.18
NF1-223ENST00000584328 BIN1O00499 593 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 SCAMP3O14828 347 aaKnown RBP7.65□□□□□ -1.18
NF1-223ENST00000584328 PAPLNO95428 1278 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 A2MP01023 1474 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 RAG1P15918 1043 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 GBP1P32455 592 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 ZNF165P49910 485 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 OVOS1Q6IE37 1185 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 ATG4DQ86TL0 474 aaPredicted RBP7.65□□□□□ -1.18
NF1-223ENST00000584328 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
NF1-223ENST00000584328 DTWD2Q8NBA8 298 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 MRRFQ96E11 262 aaKnown RBP7.65□□□□□ -1.18
NF1-223ENST00000584328 KREMEN1Q96MU8 473 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 KCNH3Q9ULD8 1083 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
NF1-223ENST00000584328 RGS13O14921 159 aa7.64□□□□□ -1.19
NF1-223ENST00000584328 LRRN2O75325 713 aa7.64□□□□□ -1.19
NF1-223ENST00000584328 CHMP4BP1P59074 171 aa7.64□□□□□ -1.19
NF1-223ENST00000584328 RGS22Q8NE09 1264 aa7.64□□□□□ -1.19
NF1-223ENST00000584328 ASIC4Q96FT7 647 aa7.64□□□□□ -1.19
NF1-223ENST00000584328 DUSP15Q9H1R2 295 aaPredicted RBP7.64□□□□□ -1.19
NF1-223ENST00000584328 TRIT1Q9H3H1 467 aaKnown RBP7.64□□□□□ -1.19
NF1-223ENST00000584328 ADGBQ8N7X0 1667 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 ERBINQ96RT1 1412 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 WASH4PA8MWX3 477 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 TSPY4P0CV99 314 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 TSPY10P0CW01 314 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 RACK1P63244 317 aaKnown RBP7.63□□□□□ -1.19
NF1-223ENST00000584328 ASPNQ9BXN1 380 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 GPATCH2Q9NW75 528 aa7.63□□□□□ -1.19
NF1-223ENST00000584328 DDX41Q9UJV9 622 aaKnown RBP7.63□□□□□ -1.19
NF1-223ENST00000584328 DUOX2Q9NRD8 1548 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 KIF15Q9NS87 1388 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 UBOX5O94941 541 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 TPP2P29144 1249 aaPredicted RBP7.62□□□□□ -1.19
NF1-223ENST00000584328 CDCP2Q5VXM1 449 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 NLRC3Q7RTR2 1065 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 TMPRSS7Q7RTY8 843 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 ATG4CQ96DT6 458 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 FMNL2Q96PY5 1086 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 GPR62Q9BZJ7 368 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 ADAMTSL3P82987 1691 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 MROH1Q8NDA8 1641 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 EIF2AK4Q9P2K8 1649 aaKnown RBP7.62□□□□□ -1.19
NF1-223ENST00000584328 FAM135AQ9P2D6 1515 aa7.62□□□□□ -1.19
NF1-223ENST00000584328 HFM1A2PYH4 1435 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 ANKRD30AQ9BXX3 1397 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 RNF17Q9BXT8 1623 aaKnown RBP7.61□□□□□ -1.19
NF1-223ENST00000584328 ESR1P03372 595 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 POLR2BP30876 1174 aaKnown RBP7.61□□□□□ -1.19
NF1-223ENST00000584328 FAM50AQ14320 339 aaKnown RBP7.61□□□□□ -1.19
NF1-223ENST00000584328 CREG2Q8IUH2 290 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 TMEM40Q8WWA1 233 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 ANTXR1Q9H6X2 564 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
NF1-223ENST00000584328 CTNND2Q9UQB3 1225 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 PRDM15P57071 1507 aaPredicted RBP7.61□□□□□ -1.19
NF1-223ENST00000584328 KDM5DQ9BY66 1539 aa7.61□□□□□ -1.19
NF1-223ENST00000584328 DEPDC5O75140 1603 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 VWDEQ8N2E2 1590 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 UNCXA6NJT0 531 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 SRFP11831 508 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 LRRFIP1Q32MZ4 808 aaKnown RBP7.6□□□□□ -1.19
NF1-223ENST00000584328 METTL16Q86W50 562 aaKnown RBP7.6□□□□□ -1.19
NF1-223ENST00000584328 FLAD1Q8NFF5 587 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 VWCEQ96DN2 955 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.6□□□□□ -1.19
NF1-223ENST00000584328 CCDC9Q9Y3X0 531 aaKnown RBP7.6□□□□□ -1.19
NF1-223ENST00000584328 NAIPQ13075 1403 aa7.6□□□□□ -1.19
NF1-223ENST00000584328 TXKP42681 527 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 RNF4P78317 190 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 TSPYL5Q86VY4 417 aaPredicted RBP7.59□□□□□ -1.19
NF1-223ENST00000584328 ZNF654Q8IZM8 581 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 FAM168AQ92567 244 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 ALPK1Q96QP1 1244 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 SLAMF8Q9P0V8 285 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 ANKRD50Q9ULJ7 1429 aa7.59□□□□□ -1.19
NF1-223ENST00000584328 LMTK2Q8IWU2 1503 aa7.58□□□□□ -1.2
NF1-223ENST00000584328 MEIS3P2A8K0S8 358 aa7.58□□□□□ -1.2
NF1-223ENST00000584328 NME1P15531 152 aaKnown RBP7.58□□□□□ -1.2
NF1-223ENST00000584328 HDLBPQ00341 1268 aaKnown RBP7.58□□□□□ -1.2
NF1-223ENST00000584328 ZNRF3Q9ULT6 936 aa7.58□□□□□ -1.2
NF1-223ENST00000584328 MADDQ8WXG6 1647 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 CLEC3AO75596 197 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 LTKP29376 864 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 GDNFP39905 211 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 CCNFP41002 786 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 EGR3Q06889 387 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 CLEC16AQ2KHT3 1053 aa7.57□□□□□ -1.2
NF1-223ENST00000584328 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
NF1-223ENST00000584328 C9orf131Q5VYM1 1079 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms