RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 IKQ13123 557 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TICAM2Q86XR7 235 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TRPV1Q8NER1 839 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MAML3Q96JK9 1138 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 OSBPL3Q9H4L5 887 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ANAPC4Q9UJX5 808 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 FEM1BQ9UK73 627 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SYNPO2Q9UMS6 1093 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MTMR7Q9Y216 660 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ZNF236Q9UL36 1845 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MCCP23508 829 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 COPB2P35606 906 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SLC1A4P43007 532 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 PPP4R3BQ5MIZ7 849 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 PRAMEF19Q5SWL8 479 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ANO1Q5XXA6 986 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 C7orf61Q8IZ16 206 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 RAVER2Q9HCJ3 691 aaKnown RBP16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 IL17RBQ9NRM6 502 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 CEP290O15078 2479 aa16.13■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MSCO60682 206 aa16.12■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
CDK5RAP3-233ENST00000584186 CYBAP13498 195 aa16.12■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MFAP1P55081 439 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ORC4O43929 436 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 IGHA2P01877 340 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 STAT2P52630 851 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 GMCL1Q96IK5 515 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SLC38A10Q9HBR0 1119 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 PFASO15067 1338 aa16.11■□□□□ 0.17
CDK5RAP3-233ENST00000584186 RANBP2P49792 3224 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SEPT4O43236 478 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ZNF792Q3KQV3 632 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 CHURC1Q8WUH1 139 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SENP6Q9GZR1 1112 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 HOMER2Q9NSB8 354 aa16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-233ENST00000584186 HIP1O00291 1037 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 FGRP09769 529 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 COL6A1P12109 1028 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 SNAP25P60880 206 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 GJC2Q5T442 439 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 FAM160B2Q86V87 743 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 RBM27Q9P2N5 1060 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ZMYM6O95789 1325 aa16.09■□□□□ 0.17
CDK5RAP3-233ENST00000584186 ZNF213O14771 459 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 SYN1P17600 705 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 PDE4AP27815 886 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 AKNAD1Q5T1N1 836 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TBC1D10CQ8IV04 446 aa16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 DIS3Q9Y2L1 958 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-233ENST00000584186 DNM1LO00429 736 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 FDX1P10109 184 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TAL1P17542 331 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 OAZ1P54368 228 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 LRRC26Q2I0M4 334 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 ARRDC4Q8NCT1 418 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-233ENST00000584186 FRMPD3Q5JV73 1810 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 FRMPD2Q68DX3 1309 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 KBTBD13C9JR72 458 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 NOVP48745 357 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 FXR1P51114 621 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 CHST13Q8NET6 341 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 DCAF4Q8WV16 495 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 GPCPD1Q9NPB8 672 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 PRR12Q9ULL5 1215 aa16.06■□□□□ 0.16
CDK5RAP3-233ENST00000584186 NEDD4P46934 1319 aa16.05■□□□□ 0.16
CDK5RAP3-233ENST00000584186 DNAJC25-GNG10A0A024R161 153 aa16.05■□□□□ 0.16
CDK5RAP3-233ENST00000584186 RARBP10826 455 aa16.05■□□□□ 0.16
CDK5RAP3-233ENST00000584186 PCP11498 1178 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms