RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 SLC26A6Q9BXS9 759 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 NMRK2Q9NPI5 230 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 KCNH4Q9UQ05 1017 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 AFG3L2Q9Y4W6 797 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 BAZ2BQ9UIF8 2168 aaKnown RBP10.64□□□□□ -0.71
CASC3-209ENST00000583902 OTOFQ9HC10 1997 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 PTPRFP10586 1907 aa10.64□□□□□ -0.71
CASC3-209ENST00000583902 SRCAPQ6ZRS2 3230 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 A0A1W2PRG0 241 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 ZBTB5O15062 677 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 ZSCAN22P10073 491 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 ZBTB48P10074 688 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 FDPSP14324 419 aaKnown RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 VGLL4Q14135 290 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 GSE1Q14687 1217 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 CSPP1Q1MSJ5 1256 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 MAP1SQ66K74 1059 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 CCDC144CPQ8IYA2 1237 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 SRBD1Q8N5C6 995 aaKnown RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 PRPF38AQ8NAV1 312 aaKnown RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 SLC10A4Q96EP9 437 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 HHIPL1Q96JK4 782 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 ALG1Q9BT22 464 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 FOXP1Q9H334 677 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 HOXC10Q9NYD6 342 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 SLC45A1Q9Y2W3 748 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 SNCAIPQ9Y6H5 919 aa10.63□□□□□ -0.71
CASC3-209ENST00000583902 V9GY48 417 aaPredicted RBP10.63□□□□□ -0.71
CASC3-209ENST00000583902 JAK2O60674 1132 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 TOMM70O94826 608 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 RXRAP19793 462 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 HOXA7P31268 230 aaPredicted RBP10.62□□□□□ -0.71
CASC3-209ENST00000583902 OAZ1P54368 228 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 JAG1P78504 1218 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 SPP2Q13103 211 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 SYDE2Q5VT97 1194 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 PRAMEF18Q5VWM3 479 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 ZKSCAN4Q969J2 545 aaPredicted RBP10.62□□□□□ -0.71
CASC3-209ENST00000583902 DDX11Q96FC9 970 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
CASC3-209ENST00000583902 MAP3K20Q9NYL2 800 aaKnown RBP10.62□□□□□ -0.71
CASC3-209ENST00000583902 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 A0A0G2JLL6 359 aaPredicted RBP10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L15C9J2P7 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L13C9JLJ4 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 TMEM232C9JQI7 657 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L11C9JVI0 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L18D6R9N7 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L22D6RA61 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L17D6RBQ6 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L19D6RCP7 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L20D6RJB6 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 GOLGA6L22H0YM25 854 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 MAP3K13O43283 966 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 CELF2O95319 508 aaKnown RBP10.61□□□□□ -0.71
CASC3-209ENST00000583902 PLEKHA8P1O95397 391 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 MMP1P03956 469 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 COPB2P35606 906 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 ECE1P42892 770 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 GTF2A2P52657 109 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 INHBEP58166 350 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 USP17L24Q0WX57 530 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 SNAPC2Q13487 334 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 MTMR2Q13614 643 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 PKN1Q16512 942 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 LHX8Q68G74 356 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 PRRT2Q7Z6L0 340 aaPredicted RBP10.61□□□□□ -0.71
CASC3-209ENST00000583902 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 DAGLBQ8NCG7 672 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 SPRYD3Q8NCJ5 442 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 ACER1Q8TDN7 264 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 PHKBQ93100 1093 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 AMNQ9BXJ7 453 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 C6orf50Q9HD87 102 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 ZCCHC17Q9NP64 241 aaKnown RBP10.61□□□□□ -0.71
CASC3-209ENST00000583902 MTMR6Q9Y217 621 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 LOC285556D6RIA3 1793 aa10.61□□□□□ -0.71
CASC3-209ENST00000583902 ATP2A1O14983 1001 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 CYTH3O43739 400 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 RAD21O60216 631 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 F13A1P00488 732 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 CETPP11597 493 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 VCAM1P19320 739 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 U2AF2P26368 475 aaKnown RBP eCLIP10.6□□□□□ -0.711e-8■■■□□ 15.8
CASC3-209ENST00000583902 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 IKQ13123 557 aaPredicted RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 GNL2Q13823 731 aaKnown RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 COG2Q14746 738 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 KRT40Q6A162 431 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 LBX2Q6XYB7 198 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms