RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
CCDC84-210ENST00000583842 NPLOC4Q8TAT6 608 aa13.15□□□□□ -0.3
CCDC84-210ENST00000583842 NBPF3Q9H094 633 aa13.15□□□□□ -0.3
CCDC84-210ENST00000583842 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
CCDC84-210ENST00000583842 RLFQ13129 1914 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
CCDC84-210ENST00000583842 SLC1A4P43007 532 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 STAT2P52630 851 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 PLS1Q14651 629 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 WDR78Q5VTH9 848 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
CCDC84-210ENST00000583842 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 ESR2Q92731 530 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
CCDC84-210ENST00000583842 RAD50Q92878 1312 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 DNAJC25-GNG10A0A024R161 153 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 PDE4AP27815 886 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
CCDC84-210ENST00000583842 TRIM32Q13049 653 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 CCL14Q16627 93 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 STK11IPQ8N1F8 1099 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 DPF3Q92784 378 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 MMP19Q99542 508 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 CNNM2Q9H8M5 875 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
CCDC84-210ENST00000583842 TACC3Q9Y6A5 838 aa13.13□□□□□ -0.31
CCDC84-210ENST00000583842 MKI67P46013 3256 aaKnown RBP13.12□□□□□ -0.31
CCDC84-210ENST00000583842 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 SEPT4O43236 478 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 COL6A1P12109 1028 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 CYBAP13498 195 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 MCCP23508 829 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
CCDC84-210ENST00000583842 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
CCDC84-210ENST00000583842 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
CCDC84-210ENST00000583842 TINF2Q9BSI4 451 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 KRT23Q9C075 422 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
CCDC84-210ENST00000583842 DDX20Q9UHI6 824 aaKnown RBP13.12□□□□□ -0.31
CCDC84-210ENST00000583842 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 BRCA2P51587 3418 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 RAD21O60216 631 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
CCDC84-210ENST00000583842 DDX11Q96FC9 970 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 NUP88Q99567 741 aaPredicted RBP13.11□□□□□ -0.31
CCDC84-210ENST00000583842 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 C11orf49Q9H6J7 331 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 RIPK3Q9Y572 518 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 SYNGAP1Q96PV0 1343 aa13.11□□□□□ -0.31
CCDC84-210ENST00000583842 MYH8P13535 1937 aa13.1□□□□□ -0.31
CCDC84-210ENST00000583842 CHMLP26374 656 aa13.1□□□□□ -0.31
CCDC84-210ENST00000583842 CCND3P30281 292 aaPredicted RBP13.1□□□□□ -0.31
CCDC84-210ENST00000583842 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
CCDC84-210ENST00000583842 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
CCDC84-210ENST00000583842 ZSWIM5Q9P217 1185 aa13.1□□□□□ -0.31
CCDC84-210ENST00000583842 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
CCDC84-210ENST00000583842 A0A1W2PPC1 479 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 DNM1LO00429 736 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 EVI5O60447 810 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 NMT2O60551 498 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 GSPT1P15170 499 aaKnown RBP13.09□□□□□ -0.31
CCDC84-210ENST00000583842 CYP2C19P33261 490 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 C1orf53Q5VUE5 145 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
CCDC84-210ENST00000583842 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 MTA3Q9BTC8 594 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 PRR12Q9ULL5 1215 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 ZNF536O15090 1300 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 ZNF236Q9UL36 1845 aa13.09□□□□□ -0.31
CCDC84-210ENST00000583842 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 H0YGN5 161 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ICAM1P05362 532 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 PDHBP11177 359 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 BMP8BP34820 402 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 NKX3-2P78367 333 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
CCDC84-210ENST00000583842 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ANKRD35Q8N283 1001 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 TRPV1Q8NER1 839 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
CCDC84-210ENST00000583842 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ABHD16BQ9H3Z7 469 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
CCDC84-210ENST00000583842 CNPY2Q9Y2B0 182 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 PFASO15067 1338 aa13.08□□□□□ -0.32
CCDC84-210ENST00000583842 ASB14A6NK59 587 aa13.07□□□□□ -0.32
CCDC84-210ENST00000583842 SGSM2O43147 1006 aa13.07□□□□□ -0.32
CCDC84-210ENST00000583842 ZNF865P0CJ78 1059 aaPredicted RBP13.07□□□□□ -0.32
CCDC84-210ENST00000583842 CNGA1P29973 690 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms