RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 HS1BP3Q53T59 392 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 RSBN1LQ6PCB5 846 aaPredicted RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 SH3BP5LQ7L8J4 393 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 ZSCAN30Q86W11 494 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 ZFPM1Q8IX07 1006 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 NIM1KQ8IY84 436 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 RTKN2Q8IZC4 609 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 BLIDQ8IZY5 108 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 AOPEPQ8N6M6 819 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 ZNF713Q8N859 430 aaPredicted RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 CCDC12Q8WUD4 166 aaPredicted RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 ERCC4Q92889 916 aaPredicted RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 FERMT2Q96AC1 680 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 RRP36Q96EU6 259 aaKnown RBP6.29□□□□□ -1.4
CRLF3-204ENST00000583527 TIGD1Q96MW7 591 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 CABP5Q9NP86 173 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 FAM13BQ9NYF5 915 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 TMOD2Q9NZR1 351 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 KCNH3Q9ULD8 1083 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 CNTNAP1P78357 1384 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 PTPRFP10586 1907 aa6.29□□□□□ -1.4
CRLF3-204ENST00000583527 SMCHD1A6NHR9 2005 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SBF1O95248 1867 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 PHIPQ8WWQ0 1821 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 CCDC194A0A1B0GVG4 234 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 DDTLA6NHG4 134 aaPredicted RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 M0R2N6 131 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 PSMD14O00487 310 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 BIN1O00499 593 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 MPHOSPH10O00566 681 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ENTPD3O75355 529 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ZNF202O95125 648 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SLURP2P0DP57 97 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ZNF75DP51815 510 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 PNOCQ13519 176 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 IQCB1Q15051 598 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ZRSR1Q15695 479 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SPECC1Q5M775 1068 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 PPP4R3BQ5MIZ7 849 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 GALNT17Q6IS24 598 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SARM1Q6SZW1 724 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 MAMSTRQ6ZN01 415 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 KRBA2Q6ZNG9 492 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ZSCAN29Q8IWY8 852 aaPredicted RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 DHX40Q8IX18 779 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 REXO1Q8N1G1 1221 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SLC39A7Q92504 469 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SYMPKQ92797 1274 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SDF4Q9BRK5 362 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 CSRNP2Q9H175 543 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 TAOK3Q9H2K8 898 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 DHX36Q9H2U1 1008 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 KIAA1468Q9P260 1216 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 TUBE1Q9UJT0 475 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 ZKSCAN5Q9Y2L8 839 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 SRPRBQ9Y5M8 271 aaKnown RBP6.28□□□□□ -1.4
CRLF3-204ENST00000583527 LOXHD1Q8IVV2 1947 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 A0A0G2JMZ2 1700 aa6.28□□□□□ -1.4
CRLF3-204ENST00000583527 A0A087X0B3 334 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 CLRN2A0PK11 232 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 VWA3AA6NCI4 1184 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 GOLGA6L19H0YKK7 550 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 NFKBIEO00221 500 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 RAD17O75943 681 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 GDF11O95390 407 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 KCNA3P22001 575 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 POLD1P28340 1107 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 SMARCA1P28370 1054 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 CDC25BP30305 580 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 MCM7P33993 719 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 ADCY7P51828 1080 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 NLRP12P59046 1061 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PLCB2Q00722 1185 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 ATP2B2Q01814 1243 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 POSTNQ15063 836 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 ZNF174Q15697 407 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 INF2Q27J81 1249 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 TMEM179Q6ZVK1 233 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 USP49Q70CQ1 688 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 KRT25Q7Z3Z0 450 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PLA2G4DQ86XP0 818 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 CNNM3Q8NE01 707 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 DHX58Q96C10 678 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 MS4A3Q96HJ5 214 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 CCDC17Q96LX7 622 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PIGSQ96S52 555 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 CSRNP1Q96S65 589 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 GMLQ99445 158 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 BPIFA3Q9BQP9 254 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 MRIQ9BWK5 157 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 NAT10Q9H0A0 1025 aaKnown RBP6.27□□□□□ -1.41
CRLF3-204ENST00000583527 RIOX1Q9H6W3 641 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms