RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TBC1D22AQ8WUA7 517 aa9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 TSEN34Q9BSV6 310 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 ZNF341Q9BYN7 854 aa9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 ZCCHC17Q9NP64 241 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 USTQ9Y2C2 406 aa9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 HRH3Q9Y5N1 445 aa9.86□□□□□ -0.83
PPP4R1-225ENST00000583438 GAKO14976 1311 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 MYPNQ86TC9 1320 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 WDHD1O75717 1129 aaPredicted RBP9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 ELNP15502 786 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 PPATQ06203 517 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 CLN3Q13286 438 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 SHROOM1Q2M3G4 852 aaPredicted RBP9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 MRPL14Q6P1L8 145 aaKnown RBP9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 FAM9BQ8IZU0 186 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 CRIPAKQ8N1N5 446 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 SIL1Q9H173 461 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 TNNQ9UQP3 1299 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 LAMA2P24043 3122 aaKnown RBP9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 DNAH12Q6ZR08 3092 aa9.85□□□□□ -0.83
PPP4R1-225ENST00000583438 MYH1P12882 1939 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 A0A0G2JLL6 359 aaPredicted RBP9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 M0R2N6 131 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 MEN1O00255 615 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 AXIN1O15169 862 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 ST8SIA5O15466 376 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 GRK4P32298 578 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 GJA8P48165 433 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 RGS3P49796 1198 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 JAG1P78504 1218 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 RASGRF1Q13972 1273 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 TREML2Q5T2D2 321 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 PI16Q6UXB8 463 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 PRRT2Q7Z6L0 340 aaPredicted RBP9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 VPS37DQ86XT2 251 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 DIS3LQ8TF46 1054 aaKnown RBP9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 ESYT1Q9BSJ8 1104 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 LTBP2Q14767 1821 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 PARP14Q460N5 1801 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 RLFQ13129 1914 aa9.84□□□□□ -0.83
PPP4R1-225ENST00000583438 SALL1Q9NSC2 1324 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 BACH1O14867 736 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 SPINT1O43278 529 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 FRAT2O75474 233 aaPredicted RBP9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 PTPRAP18433 802 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 RHBDL3P58872 404 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 MAP3K10Q02779 954 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 CAVIN4Q5BKX8 364 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 LPIN2Q92539 896 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 INSM2Q96T92 566 aaPredicted RBP9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 AAASQ9NRG9 546 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 USP40Q9NVE5 1235 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 SUGT1Q9Y2Z0 365 aa9.83□□□□□ -0.84
PPP4R1-225ENST00000583438 A0A0C4DFX4 3053 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 CUL9Q8IWT3 2517 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 GJB1P08034 283 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 IFIT1P09914 478 aaKnown RBP9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 FLT3LGP49771 235 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 SMTNP53814 917 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 EPHA4P54764 986 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 CENPCQ03188 943 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 SLFN5Q08AF3 891 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 ATP2B3Q16720 1220 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 SWI5Q1ZZU3 235 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 DCAF15Q66K64 600 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 NBPF11Q86T75 865 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 U2AF1L4Q8WU68 220 aaKnown RBP9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 PURBQ96QR8 312 aaKnown RBP9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 MEIS3Q99687 375 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 DACH1Q9UI36 760 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 LRRFIP2Q9Y608 721 aaKnown RBP9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 MAST3O60307 1309 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 PTPRCP08575 1304 aa9.82□□□□□ -0.84
PPP4R1-225ENST00000583438 UPP2O95045 317 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 BMP2P12643 396 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 PDIA4P13667 645 aaKnown RBP9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 SLC5A1P13866 664 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 CTSOP43234 321 aaPredicted RBP9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 TIMM10P62072 90 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 TRMT2AQ8IZ69 625 aaKnown RBP9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 SCYL3Q8IZE3 742 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 WDR66Q8TBY9 1149 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 IDI2Q9BXS1 227 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 RNF208Q9H0X6 261 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 PAK6Q9NQU5 681 aaPredicted RBP9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 TMOD2Q9NZR1 351 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
PPP4R1-225ENST00000583438 A6NJY4 79 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 ADCY3O60266 1144 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 CIAO1O76071 339 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 LDHBP07195 334 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 FOXD4L5Q5VV16 416 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms