RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-208ENST00000582629 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
ITGB4-208ENST00000582629 ZBED4O75132 1171 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 PRDM1O75626 825 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
ITGB4-208ENST00000582629 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 FERMT2Q96AC1 680 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 CEP95Q96GE4 821 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 MTMR4Q9NYA4 1195 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 COL6A3P12111 3177 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
ITGB4-208ENST00000582629 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 TTLL1O95922 423 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 PGK1P00558 417 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
ITGB4-208ENST00000582629 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
ITGB4-208ENST00000582629 PDE4BQ07343 736 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
ITGB4-208ENST00000582629 GMCL1P1Q8NEA9 526 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 FEM1BQ9UK73 627 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
ITGB4-208ENST00000582629 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 TSPY3P0CV98 308 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 TSPY8P0CW00 308 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
ITGB4-208ENST00000582629 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
ITGB4-208ENST00000582629 NEDD1Q8NHV4 660 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
ITGB4-208ENST00000582629 NAPBQ9H115 298 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
ITGB4-208ENST00000582629 ADAMTS4O75173 837 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 MX1P20591 662 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 OAZ1P54368 228 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 TLE2Q04725 743 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 PPARAQ07869 468 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 ZMYM1Q5SVZ6 1142 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-208ENST00000582629 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-208ENST00000582629 BADQ92934 168 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
ITGB4-208ENST00000582629 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
ITGB4-208ENST00000582629 MCM3APO60318 1980 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 A0A1W2PQ45 241 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-208ENST00000582629 A0A1W2PQY0 241 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-208ENST00000582629 FDX1P10109 184 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 BMP3P12645 472 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 SH3RF1Q7Z6J0 888 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 CHST13Q8NET6 341 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 LENG1Q96BZ8 264 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-208ENST00000582629 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
ITGB4-208ENST00000582629 ZHX1Q9UKY1 873 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-208ENST00000582629 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
ITGB4-208ENST00000582629 TRIM43BA6NCK2 446 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 CLTBP09497 229 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 TFAP4Q01664 338 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 SHHQ15465 462 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
ITGB4-208ENST00000582629 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
ITGB4-208ENST00000582629 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 DLL1O00548 723 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 C9orf50Q5SZB4 431 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 ZNF697Q5TEC3 545 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 STARD7Q9NQZ5 370 aa17.18■□□□□ 0.34
ITGB4-208ENST00000582629 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-208ENST00000582629 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-208ENST00000582629 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
ITGB4-208ENST00000582629 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
ITGB4-208ENST00000582629 STAT2P52630 851 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 ACLYP53396 1101 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 FAM160B2Q86V87 743 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 FGD4Q96M96 766 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 ABHD16BQ9H3Z7 469 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
ITGB4-208ENST00000582629 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
ITGB4-208ENST00000582629 SLC1A4P43007 532 aa17.16■□□□□ 0.34
ITGB4-208ENST00000582629 ARMCX2Q7L311 632 aa17.16■□□□□ 0.34
ITGB4-208ENST00000582629 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
ITGB4-208ENST00000582629 TOX2Q96NM4 488 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms