RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 FBXO11Q86XK2 927 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 GOLGA5Q8TBA6 731 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 IWS1Q96ST2 819 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 H0YCG3 227 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 RAD21O60216 631 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 RASA1P20936 1047 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 UBASH3AP57075 661 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 ALCAMQ13740 583 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 CALCRLQ16602 461 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 TKFCQ3LXA3 575 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 GMCL1P1Q8NEA9 526 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 VPS54Q9P1Q0 977 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 FEM1BQ9UK73 627 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 SUPT20HL1Q3ZLR7 823 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 RSBN1LQ6PCB5 846 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 LPAR1Q92633 364 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 CD2APQ9Y5K6 639 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 MRVI1Q9Y6F6 885 aa11.4□□□□□ -0.58
TRAPPC8-211ENST00000582539 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 ZBTB5O15062 677 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 SETQ01105 290 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 KCNB1Q14721 858 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 FAM47AQ5JRC9 791 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 RETREG2Q8NC44 543 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 A0A1B0GVL5 298 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 FDPSP14324 419 aaKnown RBP11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 DDR1Q08345 913 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 FAM20AQ96MK3 541 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 WDR11Q9BZH6 1224 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 NR1I2O75469 434 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 PRDM1O75626 825 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 SPATA1Q5VX52 437 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 CABP7Q86V35 215 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 AOPEPQ8N6M6 819 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 ZMYND12Q9H0C1 365 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 CLIC4Q9Y696 253 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 MYH13Q9UKX3 1938 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 BMP3P12645 472 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 MCM3P25205 808 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 CDC27P30260 824 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 FOXR2Q6PJQ5 311 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 CCDC82Q8N4S0 544 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 PSTPIP2Q9H939 334 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
TRAPPC8-211ENST00000582539 PVALEFA0A1B0GWK0 134 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 CETN1Q12798 172 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 ARHGAP27Q6ZUM4 889 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 CDHR1Q96JP9 859 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 MTFR1LQ9H019 292 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 PLA2G6O60733 806 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 GAP43P17677 238 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 MCM7P33993 719 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 PAK1Q13153 545 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 HOMER1Q86YM7 354 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 DHX58Q96C10 678 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 PCMTD1Q96MG8 357 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 TBC1D12O60347 775 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 VWA3BQ502W6 1294 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 VPS36Q86VN1 386 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 GOLGA6L1Q8N7Z2 621 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 GTF3C2Q8WUA4 911 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 MKL1Q969V6 931 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 TMOD4Q9NZQ9 345 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 SYNRGQ9UMZ2 1314 aa11.38□□□□□ -0.59
TRAPPC8-211ENST00000582539 POLR2DO15514 142 aaKnown RBP11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 OFD1O75665 1012 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 ZNF543Q08ER8 600 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 PKNOX2Q96KN3 472 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 TIPINQ9BVW5 301 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 RXRAP19793 462 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 PGBD1Q96JS3 809 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 MYL10Q9BUA6 226 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 KCNJ14Q9UNX9 436 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 VWA3AA6NCI4 1184 aa11.37□□□□□ -0.59
TRAPPC8-211ENST00000582539 NDUFA8P51970 172 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms