RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 EHD4Q9H223 541 aa11.3□□□□□ -0.6
GGA3-212ENST00000582376 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
GGA3-212ENST00000582376 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
GGA3-212ENST00000582376 ZNF536O15090 1300 aa11.3□□□□□ -0.6
GGA3-212ENST00000582376 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 BRWD1Q9NSI6 2320 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 A0A1W2PRG0 241 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 KIF28PB7ZC32 967 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 ARHGEF15O94989 841 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 SNAI1O95863 264 aaPredicted RBP11.29□□□□□ -0.6
GGA3-212ENST00000582376 KCNA5P22460 613 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 ARID4AP29374 1257 aaPredicted RBP11.29□□□□□ -0.6
GGA3-212ENST00000582376 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 MCAMP43121 646 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 PTPN5P54829 565 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 SEPT2Q15019 361 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
GGA3-212ENST00000582376 ADGRA1Q86SQ6 560 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 RIOX2Q8IUF8 465 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 PHOSPHO2Q8TCD6 241 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 SCLYQ96I15 445 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 PRKRIP1Q9H875 184 aaPredicted RBP11.29□□□□□ -0.6
GGA3-212ENST00000582376 PTPRCP08575 1304 aa11.29□□□□□ -0.6
GGA3-212ENST00000582376 REV3LO60673 3130 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 GFRA3O60609 400 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
GGA3-212ENST00000582376 ACTN1P12814 892 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 COPB2P35606 906 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 TFCP2Q12800 502 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
GGA3-212ENST00000582376 TTC6Q86TZ1 520 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 PRSS33Q8NF86 280 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
GGA3-212ENST00000582376 ZDBF2Q9HCK1 2354 aa11.27□□□□□ -0.6
GGA3-212ENST00000582376 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 ADCY6O43306 1168 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 CABYRO75952 493 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 UQCRFS1P1P0C7P4 283 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 SHMT1P34896 483 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 STAT3P40763 770 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 USP5P45974 858 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 DYNLL1P63167 89 aaKnown RBP11.27□□□□□ -0.61
GGA3-212ENST00000582376 ITGA7Q13683 1181 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 ACVR2BQ13705 512 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 KIAA1755Q5JYT7 1200 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 DEFB128Q7Z7B8 93 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 HERC6Q8IVU3 1022 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
GGA3-212ENST00000582376 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 SEZ6LQ9BYH1 1024 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 TRPV6Q9H1D0 765 aa11.27□□□□□ -0.61
GGA3-212ENST00000582376 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.61
GGA3-212ENST00000582376 COL4A4P53420 1690 aaPredicted RBP11.27□□□□□ -0.61
GGA3-212ENST00000582376 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
GGA3-212ENST00000582376 CTAGE5O15320 804 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 B4GALT4O60513 344 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 BEX3Q00994 111 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 CCDC144BQ3MJ40 725 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 SPRED2Q7Z698 418 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 PRRX2Q99811 253 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
GGA3-212ENST00000582376 MYH1P12882 1939 aa11.26□□□□□ -0.61
GGA3-212ENST00000582376 NKX3-2P78367 333 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 SPICE1Q8N0Z3 855 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 DDX11Q96FC9 970 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 UPF3BQ9BZI7 483 aaKnown RBP11.25□□□□□ -0.61
GGA3-212ENST00000582376 ABHD16BQ9H3Z7 469 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 SNRKQ9NRH2 765 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
GGA3-212ENST00000582376 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
GGA3-212ENST00000582376 IGSF3O75054 1194 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 ZNF467Q7Z7K2 595 aaPredicted RBP11.24□□□□□ -0.61
GGA3-212ENST00000582376 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 SH2D4AQ9H788 454 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 VCPKMTQ9H867 229 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 PRKAG3Q9UGI9 489 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
GGA3-212ENST00000582376 GRIN2DO15399 1336 aa11.24□□□□□ -0.61
GGA3-212ENST00000582376 VWA5AO00534 786 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 ZEB2O60315 1214 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 SUPT20HL2P0C7V6 817 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 CYP7A1P22680 504 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 RFC2P35250 354 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 PLCD1P51178 756 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 ZP2Q05996 745 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 TCF15Q12870 199 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 IER5LQ5T953 404 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 NOL8Q76FK4 1167 aaKnown RBP11.23□□□□□ -0.61
GGA3-212ENST00000582376 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 NEK9Q8TD19 979 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
GGA3-212ENST00000582376 TMX2Q9Y320 296 aa11.23□□□□□ -0.61
GGA3-212ENST00000582376 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms