RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 HTTP42858 3142 aa12.2□□□□□ -0.46
TOP3A-212ENST00000582122 SLC15A5A6NIM6 579 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
TOP3A-212ENST00000582122 HSPA4P34932 840 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 STAT3P40763 770 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 ZNF543Q08ER8 600 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 TRAF1Q13077 416 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 PLS1Q14651 629 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 SEC23AQ15436 765 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 TKFCQ3LXA3 575 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 SLC9C1Q4G0N8 1177 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 GPR142Q7Z601 462 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 CATIPQ7Z7H3 387 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 MB21D2Q8IYB1 491 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-212ENST00000582122 KCNB2Q92953 911 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 KIFC2Q96AC6 838 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 MAP3K14Q99558 947 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-212ENST00000582122 ZKSCAN3Q9BRR0 538 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 SLC38A10Q9HBR0 1119 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 FBXO28Q9NVF7 368 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 BTBD7Q9P203 1132 aa12.19□□□□□ -0.46
TOP3A-212ENST00000582122 RBBP6Q7Z6E9 1792 aaKnown RBP12.19□□□□□ -0.46
TOP3A-212ENST00000582122 CNMDO75829 334 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
TOP3A-212ENST00000582122 CALM1P0DP23 149 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 CALM2P0DP24 149 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 CALM3P0DP25 149 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 RGS2P41220 211 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 LIFRP42702 1097 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 FLT3LGP49771 235 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 Q3C1V9 767 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 WDR78Q5VTH9 848 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-212ENST00000582122 CYB5R4Q7L1T6 521 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 DHX32Q7L7V1 743 aaKnown RBP12.18□□□□□ -0.46
TOP3A-212ENST00000582122 CHST13Q8NET6 341 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 ARMC5Q96C12 935 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 MOV10L1Q9BXT6 1211 aaKnown RBP12.18□□□□□ -0.46
TOP3A-212ENST00000582122 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 MAF1Q9H063 256 aa12.18□□□□□ -0.46
TOP3A-212ENST00000582122 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 PRC1O43663 620 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 DDAH1O94760 285 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 FCER1AP12319 257 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 PTPREP23469 700 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 GRK4P32298 578 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 KIF5BP33176 963 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 GNAQP50148 359 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 UBXN2AP68543 259 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 PRKCZQ05513 592 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 TMEM132BQ14DG7 1078 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 SYNE3Q6ZMZ3 975 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 NCAPG2Q86XI2 1143 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 IGDCC4Q8TDY8 1250 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 LZTS2Q9BRK4 669 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 PORCNQ9H237 461 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 ZNF214Q9UL59 606 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-212ENST00000582122 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 RLFQ13129 1914 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 MGAMO43451 1857 aa12.17□□□□□ -0.46
TOP3A-212ENST00000582122 BRCA2P51587 3418 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 ADCY3O60266 1144 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 HOXC6P09630 235 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 ERCC3P19447 782 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 CTGFP29279 349 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 GRB14Q14449 540 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 KCTD2Q14681 263 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 MORN1Q5T089 497 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
TOP3A-212ENST00000582122 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 NFXL1Q6ZNB6 911 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
TOP3A-212ENST00000582122 REPS2Q8NFH8 660 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 APBA2Q99767 749 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 USP26Q9BXU7 913 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 PRR12Q9ULL5 1215 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 DIS3Q9Y2L1 958 aaKnown RBP12.16□□□□□ -0.46
TOP3A-212ENST00000582122 PTCH2Q9Y6C5 1203 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
TOP3A-212ENST00000582122 ICAM1P05362 532 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 SMARCA1P28370 1054 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 RCAN1P53805 252 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 ANAPC15P60006 121 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 FGD1P98174 961 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 BLOC1S2Q6QNY1 142 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 DPP9Q86TI2 863 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 CPXCR1Q8N123 301 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 FBXL16Q8N461 479 aa12.15□□□□□ -0.46
TOP3A-212ENST00000582122 CTCFLQ8NI51 663 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms