RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 GINM1Q9NU53 330 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
SRSF1-204ENST00000581979 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 CCDC196A0A1B0GTZ2 297 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 OSBPP22059 807 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 GABPAQ06546 454 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 SH3D19Q5HYK7 790 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 MCTP1Q6DN14 999 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 KAT14Q9H8E8 782 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 AS3MTQ9HBK9 375 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 TCP11L1Q9NUJ3 509 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 ORC3Q9UBD5 711 aaPredicted RBP14.6□□□□□ -0.07
SRSF1-204ENST00000581979 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
SRSF1-204ENST00000581979 DDAH1O94760 285 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 FMNL1O95466 1100 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-204ENST00000581979 FOSBP53539 338 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 CRACR2BQ8N4Y2 399 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-204ENST00000581979 FANCBQ8NB91 859 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 NEDD1Q8NHV4 660 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 EHD4Q9H223 541 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 IL17RBQ9NRM6 502 aa14.59□□□□□ -0.07
SRSF1-204ENST00000581979 FAM217BQ9NTX9 383 aaPredicted RBP14.59□□□□□ -0.07
SRSF1-204ENST00000581979 FDPSP14324 419 aaKnown RBP14.58□□□□□ -0.07
SRSF1-204ENST00000581979 PTMSP20962 102 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 HMGCS2P54868 508 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 FCGRTP55899 365 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 JAG1P78504 1218 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 PPP2R5BQ15173 497 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 FOXD4L6Q3SYB3 417 aaPredicted RBP14.58□□□□□ -0.07
SRSF1-204ENST00000581979 FOXD4L3Q6VB84 417 aaPredicted RBP14.58□□□□□ -0.07
SRSF1-204ENST00000581979 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.07
SRSF1-204ENST00000581979 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 PNMA3Q9UL41 463 aa14.58□□□□□ -0.07
SRSF1-204ENST00000581979 MGAMO43451 1857 aa14.58□□□□□ -0.08
SRSF1-204ENST00000581979 SSRP1Q08945 709 aaKnown RBP14.58□□□□□ -0.08
SRSF1-204ENST00000581979 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
SRSF1-204ENST00000581979 CTCFLQ8NI51 663 aaPredicted RBP14.58□□□□□ -0.08
SRSF1-204ENST00000581979 SH3TC2Q8TF17 1288 aa14.58□□□□□ -0.08
SRSF1-204ENST00000581979 ANKS1AQ92625 1134 aa14.58□□□□□ -0.08
SRSF1-204ENST00000581979 PHKBQ93100 1093 aa14.58□□□□□ -0.08
SRSF1-204ENST00000581979 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
SRSF1-204ENST00000581979 MYPNQ86TC9 1320 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
SRSF1-204ENST00000581979 IFNAR1P17181 557 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 EN2P19622 333 aaPredicted RBP14.57□□□□□ -0.08
SRSF1-204ENST00000581979 BACE1P56817 501 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 TROAPQ12815 778 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.08
SRSF1-204ENST00000581979 NTRK3Q16288 839 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 SLC26A6Q9BXS9 759 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 ZBTB21Q9ULJ3 1066 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 STX8Q9UNK0 236 aa14.57□□□□□ -0.08
SRSF1-204ENST00000581979 MYH6P13533 1939 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 PLIN4Q96Q06 1357 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 AKR1B1P15121 316 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 SHMT1P34896 483 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
SRSF1-204ENST00000581979 PRKCZQ05513 592 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 PRPF38BQ5VTL8 546 aaKnown RBP14.56□□□□□ -0.08
SRSF1-204ENST00000581979 FERMT3Q86UX7 667 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 TRIM22Q8IYM9 498 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 PNMA1Q8ND90 353 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 RAET1EQ8TD07 263 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 CHAMP1Q96JM3 812 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 STK36Q9NRP7 1315 aa14.56□□□□□ -0.08
SRSF1-204ENST00000581979 MYH15Q9Y2K3 1946 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 C19orf81C9J6K1 198 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 GDF11O95390 407 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 GRK4P32298 578 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 MTMR2Q13614 643 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 SHROOM1Q2M3G4 852 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-204ENST00000581979 ANKRD13CQ8N6S4 541 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 WASF1Q92558 559 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 ALG1Q9BT22 464 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 ASCC2Q9H1I8 757 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-204ENST00000581979 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
SRSF1-204ENST00000581979 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
SRSF1-204ENST00000581979 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
SRSF1-204ENST00000581979 CCDC82Q8N4S0 544 aa14.55□□□□□ -0.08
SRSF1-204ENST00000581979 TCHHQ07283 1943 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 GREB1LQ9C091 1923 aaPredicted RBP14.54□□□□□ -0.08
SRSF1-204ENST00000581979 USP17L10C9JJH3 530 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 NCLP19338 710 aaKnown RBP14.54□□□□□ -0.08
SRSF1-204ENST00000581979 KIF5BP33176 963 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 AKAP17AQ02040 695 aaKnown RBP14.54□□□□□ -0.08
SRSF1-204ENST00000581979 SLAIN1Q8ND83 568 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 CCDC17Q96LX7 622 aa14.54□□□□□ -0.08
SRSF1-204ENST00000581979 ZSCAN16Q9H4T2 348 aaPredicted RBP14.54□□□□□ -0.08
SRSF1-204ENST00000581979 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms