RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 PLEKHM2Q8IWE5 1019 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 ANAPC4Q9UJX5 808 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 RIPK3Q9Y572 518 aa25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 SUPT16HQ9Y5B9 1047 aaKnown RBP25.27■■□□□ 1.64
CSNK1D-216ENST00000581108 TSPY2A6NKD2 308 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 COPB2P35606 906 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 SLC4A3P48751 1232 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 SNRNP48Q6IEG0 339 aaKnown RBP25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 TICAM2Q86XR7 235 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 CPXCR1Q8N123 301 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 TEX13BQ9BXU2 312 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 FEM1BQ9UK73 627 aa25.26■■□□□ 1.63
CSNK1D-216ENST00000581108 DNAH12Q6ZR08 3092 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 NMT2O60551 498 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 ZBED4O75132 1171 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 FGAP02671 866 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 BMP3P12645 472 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 ZNF792Q3KQV3 632 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 ANO1Q5XXA6 986 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 ZNF589Q86UQ0 364 aaPredicted RBP25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 CHMP4CQ96CF2 233 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 IL17RBQ9NRM6 502 aa25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 ZMYND8Q9ULU4 1186 aaPredicted RBP25.25■■□□□ 1.63
CSNK1D-216ENST00000581108 RANBP6O60518 1105 aaKnown RBP25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 HSPD1P10809 573 aaKnown RBP25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 SENP6Q9GZR1 1112 aaPredicted RBP25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 OSBPL3Q9H4L5 887 aa25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 SLC38A10Q9HBR0 1119 aa25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 RAVER2Q9HCJ3 691 aaKnown RBP25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 STX8Q9UNK0 236 aa25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 CTDP1Q9Y5B0 961 aaPredicted RBP25.24■■□□□ 1.63
CSNK1D-216ENST00000581108 TMEM232C9JQI7 657 aa25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 ATP2A1O14983 1001 aa25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 SEPT4O43236 478 aa25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 SYN1P17600 705 aa25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 LRRC26Q2I0M4 334 aa25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 ISY1Q9ULR0 285 aaKnown RBP25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 DIS3Q9Y2L1 958 aaKnown RBP25.23■■□□□ 1.63
CSNK1D-216ENST00000581108 ORC4O43929 436 aa25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 FGRP09769 529 aa25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 SDSP20132 328 aa25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 MCCP23508 829 aa25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 GJC2Q5T442 439 aaPredicted RBP25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 TINF2Q9BSI4 451 aa25.22■■□□□ 1.63
CSNK1D-216ENST00000581108 SLC1A4P43007 532 aa25.21■■□□□ 1.63
CSNK1D-216ENST00000581108 PPP4R3BQ5MIZ7 849 aa25.21■■□□□ 1.63
CSNK1D-216ENST00000581108 DDX11Q96FC9 970 aa25.21■■□□□ 1.63
CSNK1D-216ENST00000581108 GMCL1Q96IK5 515 aa25.21■■□□□ 1.63
CSNK1D-216ENST00000581108 CCDC171Q6TFL3 1326 aa25.2■■□□□ 1.62
CSNK1D-216ENST00000581108 DNM1LO00429 736 aa25.2■■□□□ 1.62
CSNK1D-216ENST00000581108 ARRDC4Q8NCT1 418 aa25.2■■□□□ 1.62
CSNK1D-216ENST00000581108 TOMM22Q9NS69 142 aa25.2■■□□□ 1.62
CSNK1D-216ENST00000581108 MYCNP04198 464 aaPredicted RBP25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 TAL1P17542 331 aaPredicted RBP25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 STAT2P52630 851 aa25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 HAND2P61296 217 aa25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 RRP12Q5JTH9 1297 aaKnown RBP25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 CHURC1Q8WUH1 139 aa25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 STAG1Q8WVM7 1258 aa25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 PCDH10Q9P2E7 1040 aa25.19■■□□□ 1.62
CSNK1D-216ENST00000581108 DNAJC25-GNG10A0A024R161 153 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 NOVP48745 357 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 ATN1P54259 1190 aaPredicted RBP25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 OAZ1P54368 228 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 IKQ13123 557 aaPredicted RBP25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 RCSD1Q6JBY9 416 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 KCTD1Q719H9 257 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 RASGRP2Q7LDG7 609 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 GDF15Q99988 308 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 NRBP1Q9UHY1 535 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 MTMR7Q9Y216 660 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 SZT2Q5T011 3432 aa25.18■■□□□ 1.62
CSNK1D-216ENST00000581108 ZMYM6O95789 1325 aa25.17■■□□□ 1.62
CSNK1D-216ENST00000581108 FAM160B2Q86V87 743 aa25.17■■□□□ 1.62
CSNK1D-216ENST00000581108 ZNF865P0CJ78 1059 aaPredicted RBP25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 FDX1P10109 184 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 CWC27Q6UX04 472 aaKnown RBP25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 ANKRD35Q8N283 1001 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 CHST13Q8NET6 341 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 HOMER2Q9NSB8 354 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 FBXO40Q9UH90 709 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 MCM3APO60318 1980 aa25.16■■□□□ 1.62
CSNK1D-216ENST00000581108 KBTBD13C9JR72 458 aa25.15■■□□□ 1.62
CSNK1D-216ENST00000581108 MFAP1P55081 439 aaKnown RBP25.15■■□□□ 1.62
CSNK1D-216ENST00000581108 AGBL1Q96MI9 1066 aa25.15■■□□□ 1.62
CSNK1D-216ENST00000581108 CNPY2Q9Y2B0 182 aa25.15■■□□□ 1.62
CSNK1D-216ENST00000581108 ZNF536O15090 1300 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 A0A1W2PPC1 479 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 PLA2G6O60733 806 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 SNAI1O95863 264 aaPredicted RBP25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 BMP8BP34820 402 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 MAGEA10P43363 369 aaPredicted RBP25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 SNAP25P60880 206 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 IRX6P78412 446 aaPredicted RBP25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 LRRC41Q15345 812 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 AKNAD1Q5T1N1 836 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 DIAPH3Q9NSV4 1193 aa25.14■■□□□ 1.62
CSNK1D-216ENST00000581108 RARBP10826 455 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 ADCYAP1R1P41586 468 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms