RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TFF2Q03403 129 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 ERICH6BQ5W0A0 696 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 EAF2Q96CJ1 260 aaPredicted RBP23.31■■□□□ 1.32
LIMD2-209ENST00000580222 KIF1BPQ96EK5 621 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 ADAMTS5Q9UNA0 930 aa23.31■■□□□ 1.32
LIMD2-209ENST00000580222 SNAI1O95863 264 aaPredicted RBP23.3■■□□□ 1.32
LIMD2-209ENST00000580222 PPIGQ13427 754 aaKnown RBP eCLIP23.3■■□□□ 1.32
LIMD2-209ENST00000580222 RHPN1Q8TCX5 695 aa23.3■■□□□ 1.32
LIMD2-209ENST00000580222 DYNLL2Q96FJ2 89 aa23.3■■□□□ 1.32
LIMD2-209ENST00000580222 DIS3Q9Y2L1 958 aaKnown RBP23.3■■□□□ 1.32
LIMD2-209ENST00000580222 TMX2Q9Y320 296 aa23.3■■□□□ 1.32
LIMD2-209ENST00000580222 ADCY6O43306 1168 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 SLC25A27O95847 323 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 IGHDP01880 384 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 RIOX2Q8IUF8 465 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 PPP1R12CQ9BZL4 782 aa23.29■■□□□ 1.32
LIMD2-209ENST00000580222 AKR1B1P15121 316 aa23.28■■□□□ 1.32
LIMD2-209ENST00000580222 CERS3Q8IU89 383 aa23.28■■□□□ 1.32
LIMD2-209ENST00000580222 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
LIMD2-209ENST00000580222 VCPKMTQ9H867 229 aa23.28■■□□□ 1.32
LIMD2-209ENST00000580222 MCM9Q9NXL9 1143 aa23.28■■□□□ 1.32
LIMD2-209ENST00000580222 MOXD2PA6NHM9 499 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 CYP2C18P33260 490 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 KCNQ1P51787 676 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 KCTD2Q14681 263 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 TMEM179Q6ZVK1 233 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 REPS2Q8NFH8 660 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 BCL11AQ9H165 835 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 EPHX3Q9H6B9 360 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 IL1RAPL2Q9NP60 686 aa23.27■■□□□ 1.32
LIMD2-209ENST00000580222 ZNF214Q9UL59 606 aaPredicted RBP23.27■■□□□ 1.32
LIMD2-209ENST00000580222 PLXNA1Q9UIW2 1896 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 STAT3P40763 770 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 SDR42E1Q8WUS8 393 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 HERVK_113Q902F9 699 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 CCDC136Q96JN2 1154 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 ZBTB47Q9UFB7 747 aaPredicted RBP23.26■■□□□ 1.31
LIMD2-209ENST00000580222 MSRAQ9UJ68 235 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 FAM184BQ9ULE4 1060 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 CNPY2Q9Y2B0 182 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 TRANK1O15050 2925 aa23.26■■□□□ 1.31
LIMD2-209ENST00000580222 MAGEB6P1A0A0J9YX57 407 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 VWA5AO00534 786 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 ASGR1P07306 291 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 MYOGP15173 224 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 RABGGTBP53611 331 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 FAM126BQ8IXS8 530 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 TMEM199Q8N511 208 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 IL27Q8NEV9 243 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 LRFN3Q9BTN0 628 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 C1QTNF1Q9BXJ1 281 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 MYO9BQ13459 2157 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 ELP1O95163 1332 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 UMODL1Q5DID0 1318 aa23.25■■□□□ 1.31
LIMD2-209ENST00000580222 ARVCFO00192 962 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 WDR46O15213 610 aaKnown RBP23.24■■□□□ 1.31
LIMD2-209ENST00000580222 ICA1Q05084 483 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 RAB30Q15771 203 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 PSRC1Q6PGN9 363 aaPredicted RBP23.24■■□□□ 1.31
LIMD2-209ENST00000580222 SMC5Q8IY18 1101 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 CLASRPQ8N2M8 674 aaKnown RBP23.24■■□□□ 1.31
LIMD2-209ENST00000580222 MICALL1Q8N3F8 863 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 GLT1D1Q96MS3 346 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 IL23AQ9NPF7 189 aa23.24■■□□□ 1.31
LIMD2-209ENST00000580222 DCP1AQ9NPI6 582 aaPredicted RBP23.24■■□□□ 1.31
LIMD2-209ENST00000580222 ZHX1Q9UKY1 873 aaPredicted RBP23.24■■□□□ 1.31
LIMD2-209ENST00000580222 CTAGE5O15320 804 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 SMARCA5O60264 1052 aaPredicted RBP23.23■■□□□ 1.31
LIMD2-209ENST00000580222 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
LIMD2-209ENST00000580222 CCDC174Q6PII3 467 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 AACSQ86V21 672 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 SLC28A3Q9HAS3 691 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 RIPK3Q9Y572 518 aa23.23■■□□□ 1.31
LIMD2-209ENST00000580222 CD4P01730 458 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 C6orf222P0C671 652 aaPredicted RBP23.22■■□□□ 1.31
LIMD2-209ENST00000580222 CST5P28325 142 aaPredicted RBP23.22■■□□□ 1.31
LIMD2-209ENST00000580222 ANKRD45Q5TZF3 282 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 LCORLQ8N3X6 602 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 VTI1AQ96AJ9 217 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 VWCEQ96DN2 955 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 ARHGEF10LQ9HCE6 1279 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 PPP1R9AQ9ULJ8 1098 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 SYNGAP1Q96PV0 1343 aa23.22■■□□□ 1.31
LIMD2-209ENST00000580222 DNAJC25-GNG10A0A024R161 153 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 CYP2D7A0A087X1C5 515 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 RFXAPO00287 272 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 EEF2P13639 858 aaKnown RBP23.21■■□□□ 1.31
LIMD2-209ENST00000580222 PDE6AP16499 860 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 B4GALNT3Q6L9W6 998 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 MAMDC4Q6UXC1 1216 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 OTOP2Q7RTS6 562 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 FGD4Q96M96 766 aa23.21■■□□□ 1.31
LIMD2-209ENST00000580222 CRNKL1Q9BZJ0 848 aaKnown RBP23.21■■□□□ 1.31
LIMD2-209ENST00000580222 ZNFX1Q9P2E3 1918 aaKnown RBP23.21■■□□□ 1.31
LIMD2-209ENST00000580222 MROH7Q68CQ1 1323 aa23.2■■□□□ 1.3
LIMD2-209ENST00000580222 A0A0U1RQG5 324 aaPredicted RBP23.2■■□□□ 1.3
LIMD2-209ENST00000580222 PRKAB2O43741 272 aa23.2■■□□□ 1.3
LIMD2-209ENST00000580222 FGBP02675 491 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms