RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 PTGDRQ13258 359 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 GRB14Q14449 540 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 TMEM240Q5SV17 173 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 ABRAQ8N0Z2 381 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 SHCBP1Q8NEM2 672 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 FBXL18Q96ME1 805 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 IL23AQ9NPF7 189 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 COPRSQ9NQ92 184 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 USP40Q9NVE5 1235 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 GNL3LQ9NVN8 582 aaKnown RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 FAM198AQ9UFP1 575 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 MKI67P46013 3256 aaKnown RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 MYH2Q9UKX2 1941 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 SURF6O75683 361 aaKnown RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 IFIT1P09914 478 aaKnown RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 FGFR2P21802 821 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 ABL2P42684 1182 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 CHAF1AQ13111 956 aaPredicted RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 LRRC41Q15345 812 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 CCDC85BQ15834 202 aaPredicted RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 USP17L2Q6R6M4 530 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 RPUSD2Q8IZ73 545 aaKnown RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 C12orf42Q96LP6 360 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 NECAB3Q96P71 396 aaPredicted RBP4.11□□□□□ -1.75
CDH19-204ENST00000579658 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDH19-204ENST00000579658 TBX21Q9UL17 535 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 GAKO14976 1311 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 ELP1O95163 1332 aa4.11□□□□□ -1.75
CDH19-204ENST00000579658 DCXO43602 365 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 PDE8BO95263 885 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 IGHDP01880 384 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 LDHBP07195 334 aaKnown RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 ASNSP08243 561 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 RARBP10826 455 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 ADCYAP1R1P41586 468 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 RGS3P49796 1198 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP14P54578 494 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 HMGCS2P54868 508 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 BACE1P56817 501 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 SPP2Q13103 211 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 GRIK5Q16478 980 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 LEXMQ3ZCV2 418 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 GJC2Q5T442 439 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 PPP2R2DQ66LE6 453 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 SPTY2D1Q68D10 685 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 BMP8AQ7Z5Y6 402 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 ZSCAN29Q8IWY8 852 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 GJD3Q8N144 294 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 NKX2-4Q9H2Z4 354 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 IL1RAPL2Q9NP60 686 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 TLR7Q9NYK1 1049 aaKnown RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 BCCIPQ9P287 314 aaKnown RBP eCLIP4.1□□□□□ -1.75
CDH19-204ENST00000579658 RBPJLQ9UBG7 517 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 LIMD1Q9UGP4 676 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 MTCH2Q9Y6C9 303 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L15C9J2P7 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L13C9JLJ4 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L11C9JVI0 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L18D6R9N7 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L22D6RA61 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L17D6RBQ6 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L19D6RCP7 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L20D6RJB6 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 FGBP02675 491 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 COPB2P35606 906 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 CAP2P40123 477 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 PHKA1P46020 1223 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 KCNQ1P51787 676 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 EPHB4P54760 987 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 USP17L24Q0WX57 530 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 TCP10Q12799 353 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 G3BP1Q13283 466 aaKnown RBP eCLIP4.1□□□□□ -1.75
CDH19-204ENST00000579658 PUM3Q15397 648 aaKnown RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 CCL14Q16627 93 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 PI16Q6UXB8 463 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 DNAJC14Q6Y2X3 702 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 CENPQQ7L2Z9 268 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 SH3RF1Q7Z6J0 888 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 MSL3Q8N5Y2 521 aaKnown RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 PHOSPHO2Q8TCD6 241 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 MRRFQ96E11 262 aaKnown RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 CCDC8Q9H0W5 538 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 CEP126Q9P2H0 1117 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 DENND2AQ9ULE3 1009 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 NDUFB9Q9Y6M9 179 aa4.1□□□□□ -1.75
CDH19-204ENST00000579658 COL4A4P53420 1690 aaPredicted RBP4.1□□□□□ -1.75
CDH19-204ENST00000579658 A0A1B0GUL7 405 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 FAM86C2PA6NEL3 165 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 USP17L10C9JJH3 530 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 CIAO1O76071 339 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 CST5P28325 142 aaPredicted RBP4.09□□□□□ -1.75
CDH19-204ENST00000579658 IL15P40933 162 aaPredicted RBP4.09□□□□□ -1.75
CDH19-204ENST00000579658 ATP2B3Q16720 1220 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 NBPF20Q3BBV1 942 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 FAM178BQ8IXR5 827 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 RPAP2Q8IXW5 612 aaPredicted RBP4.09□□□□□ -1.75
CDH19-204ENST00000579658 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
CDH19-204ENST00000579658 DDX12PQ92771 950 aa4.09□□□□□ -1.75
CDH19-204ENST00000579658 EAF2Q96CJ1 260 aaPredicted RBP4.09□□□□□ -1.75
CDH19-204ENST00000579658 XAGE2Q96GT9 111 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms