RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 RIOX2Q8IUF8 465 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 FBXO28Q9NVF7 368 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CHD7Q9P2D1 2997 aa16.05■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CD4P01730 458 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 TMEM67Q5HYA8 995 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ARNTL2Q8WYA1 636 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 PIEZO1Q92508 2521 aa16.04■□□□□ 0.16
CDK5RAP3-213ENST00000579605 MUC6Q6W4X9 2439 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ADCY6O43306 1168 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 RAD21O60216 631 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CST5P28325 142 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 BEX3Q00994 111 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ACVR2BQ13705 512 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ALDH1L2Q3SY69 923 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SCLYQ96I15 445 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
CDK5RAP3-213ENST00000579605 PRR33A8MZF0 331 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 POU3F3P20264 500 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 GJA9P57773 515 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 SIAH1Q8IUQ4 282 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 TRPV6Q9H1D0 765 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
CDK5RAP3-213ENST00000579605 VWA5AO00534 786 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GNAI3P08754 354 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 NHLH1Q02575 133 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GABPAQ06546 454 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MTX1Q13505 466 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CXCL17Q6UXB2 119 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 TMEM179Q6ZVK1 233 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 NOL8Q76FK4 1167 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 API5Q9BZZ5 524 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MCM9Q9NXL9 1143 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
CDK5RAP3-213ENST00000579605 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 WDR46O15213 610 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CYP2D6P10635 497 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ICA1Q05084 483 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 DEFB128Q7Z7B8 93 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CERS3Q8IU89 383 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 SH2D4AQ9H788 454 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ADAMTS5Q9UNA0 930 aa16■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ARHGEF15O94989 841 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 AKR1B1P15121 316 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GRB10Q13322 594 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ITGA7Q13683 1181 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GJD3Q8N144 294 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ZNF214Q9UL59 606 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CDK5RAP2Q96SN8 1893 aa15.99■□□□□ 0.15
CDK5RAP3-213ENST00000579605 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 E9PSI1 815 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CTAGE5O15320 804 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 B4GALT4O60513 344 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 COPB2P35606 906 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 TAP1Q03518 808 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 SNRNP48Q6IEG0 339 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 SLC43A3Q8NBI5 491 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 VWCEQ96DN2 955 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 FBXL18Q96ME1 805 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CCDC8Q9H0W5 538 aaPredicted RBP15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 PPP1R9AQ9ULJ8 1098 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
CDK5RAP3-213ENST00000579605 A0A0G2JMZ2 1700 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 FOCADQ5VW36 1801 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 PSMC6P62333 389 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 FAM83BQ5T0W9 1011 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 SPRED2Q7Z698 418 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ZNF512BQ96KM6 892 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 ABHD16BQ9H3Z7 469 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GPR108Q9NPR9 543 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 MYH1P12882 1939 aa15.97■□□□□ 0.15
CDK5RAP3-213ENST00000579605 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 IGSF3O75054 1194 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 EEF2P13639 858 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 PTGS1P23219 599 aa15.96■□□□□ 0.15
CDK5RAP3-213ENST00000579605 CPXCR1Q8N123 301 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms