RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 C12orf42Q96LP6 360 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 ZDHHC9Q9Y397 364 aa16.05■□□□□ 0.16
TSEN54-206ENST00000579449 VPS37CA5D8V6 355 aaPredicted RBP16.04■□□□□ 0.16
TSEN54-206ENST00000579449 H3BQV1 296 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 IRF6O14896 467 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 PLA2G6O60733 806 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 BRD1O95696 1058 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 SCG2P13521 617 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 VCAM1P19320 739 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 PPIL2Q13356 520 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 PFKFB3Q16875 520 aaPredicted RBP16.04■□□□□ 0.16
TSEN54-206ENST00000579449 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 OTUD7BQ6GQQ9 843 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 CHURC1Q8WUH1 139 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 MTMR8Q96EF0 704 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 PIGSQ96S52 555 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 GJB4Q9NTQ9 266 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 FEM1BQ9UK73 627 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
TSEN54-206ENST00000579449 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 WDR33Q9C0J8 1336 aaKnown RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 CXCL11O14625 94 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 PDIA4P13667 645 aaKnown RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 GJA5P36382 358 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 STAT2P52630 851 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 FAM160B2Q86V87 743 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 HOMER1Q86YM7 354 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 RPAP3Q9H6T3 665 aaPredicted RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
TSEN54-206ENST00000579449 KCNH4Q9UQ05 1017 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 LOC285556D6RIA3 1793 aa16.03■□□□□ 0.16
TSEN54-206ENST00000579449 A0A0G2JLL6 359 aaPredicted RBP16.02■□□□□ 0.16
TSEN54-206ENST00000579449 TOMM70O94826 608 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
TSEN54-206ENST00000579449 TRIM29Q14134 588 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 KRT40Q6A162 431 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 PRRT2Q7Z6L0 340 aaPredicted RBP16.02■□□□□ 0.16
TSEN54-206ENST00000579449 FBXO18Q8NFZ0 1043 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 SHISA4Q96DD7 197 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 FBXO28Q9NVF7 368 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
TSEN54-206ENST00000579449 RLFQ13129 1914 aa16.02■□□□□ 0.15
TSEN54-206ENST00000579449 PNMA6FA0A0J9YX94 578 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 ZBTB5O15062 677 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 XBP1P17861 261 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 SNAP25P60880 206 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 CDC37Q16543 378 aaPredicted RBP16.01■□□□□ 0.15
TSEN54-206ENST00000579449 WWC2Q6AWC2 1192 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
TSEN54-206ENST00000579449 GADL1Q6ZQY3 521 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 ZNF784Q8NCA9 323 aaPredicted RBP16.01■□□□□ 0.15
TSEN54-206ENST00000579449 RGS22Q8NE09 1264 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 GPKOWQ92917 476 aaPredicted RBP eCLIP16.01■□□□□ 0.15
TSEN54-206ENST00000579449 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 WNK4Q96J92 1243 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 TANGO6Q9C0B7 1094 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 SMCHD1A6NHR9 2005 aa16.01■□□□□ 0.15
TSEN54-206ENST00000579449 STXBP3O00186 592 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 F13A1P00488 732 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 HUNKP57058 714 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 HEATR3Q7Z4Q2 680 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 SLF1Q9BQI6 1058 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 SH3GLB2Q9NR46 395 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 BARHL2Q9NY43 387 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 KCNJ14Q9UNX9 436 aa16■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L15C9J2P7 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L13C9JLJ4 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L11C9JVI0 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L18D6R9N7 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L22D6RA61 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L17D6RBQ6 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L19D6RCP7 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L20D6RJB6 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 PPP1R11O60927 126 aaPredicted RBP15.99■□□□□ 0.15
TSEN54-206ENST00000579449 FLOT1O75955 427 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 USP17L24Q0WX57 530 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 CATSPERGQ6ZRH7 1159 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 PRPF38AQ8NAV1 312 aaKnown RBP15.99■□□□□ 0.15
TSEN54-206ENST00000579449 PROCA1Q8NCQ7 364 aaPredicted RBP15.99■□□□□ 0.15
TSEN54-206ENST00000579449 COA7Q96BR5 231 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 PHF20Q9BVI0 1012 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 PPP1R9AQ9ULJ8 1098 aa15.99■□□□□ 0.15
TSEN54-206ENST00000579449 COL11A1P12107 1806 aaPredicted RBP15.98■□□□□ 0.15
TSEN54-206ENST00000579449 TCHHQ07283 1943 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 MMP1P03956 469 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 NAPAP54920 295 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 NLRP5P59047 1200 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 FSTL1Q12841 308 aa15.98■□□□□ 0.15
TSEN54-206ENST00000579449 MKRN3Q13064 507 aaKnown RBP15.98■□□□□ 0.15
TSEN54-206ENST00000579449 RESTQ13127 1097 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms