RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ZBED4O75132 1171 aa18■□□□□ 0.47
IFT20-208ENST00000578985 EXOSC10Q01780 885 aaKnown RBP18■□□□□ 0.47
IFT20-208ENST00000578985 PLS1Q14651 629 aa18■□□□□ 0.47
IFT20-208ENST00000578985 TMEM132BQ14DG7 1078 aa18■□□□□ 0.47
IFT20-208ENST00000578985 BLOC1S2Q6QNY1 142 aa18■□□□□ 0.47
IFT20-208ENST00000578985 BTNL9Q6UXG8 535 aa18■□□□□ 0.47
IFT20-208ENST00000578985 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
IFT20-208ENST00000578985 SPATC1LQ9H0A9 340 aa18■□□□□ 0.47
IFT20-208ENST00000578985 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
IFT20-208ENST00000578985 TNPO2O14787 897 aaKnown RBP17.99■□□□□ 0.47
IFT20-208ENST00000578985 GNRH1P01148 92 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
IFT20-208ENST00000578985 FDX1P10109 184 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 HOXD10P28358 340 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 SLC16A2P36021 539 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 ASPRV1Q53RT3 343 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
IFT20-208ENST00000578985 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 REPS2Q8NFH8 660 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 TCEANC2Q96MN5 208 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 PORCNQ9H237 461 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 PRR12Q9ULL5 1215 aa17.99■□□□□ 0.47
IFT20-208ENST00000578985 CCDC69A6NI79 296 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 CPA1P15085 419 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 MAPK4P31152 587 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 LIFRP42702 1097 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 PKN2Q16513 984 aaKnown RBP17.98■□□□□ 0.47
IFT20-208ENST00000578985 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 COA7Q96BR5 231 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 MOV10L1Q9BXT6 1211 aaKnown RBP17.98■□□□□ 0.47
IFT20-208ENST00000578985 SLC38A10Q9HBR0 1119 aa17.98■□□□□ 0.47
IFT20-208ENST00000578985 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
IFT20-208ENST00000578985 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
IFT20-208ENST00000578985 RPS6KB1P23443 525 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 STAT3P40763 770 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 TROAPQ12815 778 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 GRM4Q14833 912 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 ZNF654Q8IZM8 581 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 SHCBP1Q8NEM2 672 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 TM6SF1Q9BZW5 370 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 SRRDQ9UH36 339 aa17.97■□□□□ 0.47
IFT20-208ENST00000578985 ZNF214Q9UL59 606 aaPredicted RBP17.97■□□□□ 0.47
IFT20-208ENST00000578985 ATP2A1O14983 1001 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 DDAH1O94760 285 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 SLC25A27O95847 323 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 PRMT2P55345 433 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 ANAPC15P60006 121 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 SNAP25P60880 206 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 FGD1P98174 961 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 WDR78Q5VTH9 848 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 GPR142Q7Z601 462 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 PLEKHH3Q7Z736 793 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 TEX13BQ9BXU2 312 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 MCOLN1Q9GZU1 580 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 UBA5Q9GZZ9 404 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 RAVER2Q9HCJ3 691 aaKnown RBP17.96■□□□□ 0.47
IFT20-208ENST00000578985 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 MYH6P13533 1939 aa17.96■□□□□ 0.47
IFT20-208ENST00000578985 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
IFT20-208ENST00000578985 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
IFT20-208ENST00000578985 ERCC3P19447 782 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 COPB2P35606 906 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 OAZ1P54368 228 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 SNRNP48Q6IEG0 339 aaKnown RBP17.95■□□□□ 0.46
IFT20-208ENST00000578985 FBXO46Q6PJ61 603 aaPredicted RBP17.95■□□□□ 0.46
IFT20-208ENST00000578985 RUFY3Q7L099 469 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 NCAPG2Q86XI2 1143 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 STAG2Q8N3U4 1231 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 MYL10Q9BUA6 226 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 RANBP17Q9H2T7 1088 aaKnown RBP17.95■□□□□ 0.46
IFT20-208ENST00000578985 CPVLQ9H3G5 476 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 MROH8Q9H579 483 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 MAD2L2Q9UI95 211 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 GABRQQ9UN88 632 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 SLC12A7Q9Y666 1083 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
IFT20-208ENST00000578985 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
IFT20-208ENST00000578985 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 SLC4A3P48751 1232 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 PRKCZQ05513 592 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 CCDC174Q6PII3 467 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 Q6ZUG5 572 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 GJD2Q9UKL4 321 aa17.94■□□□□ 0.46
IFT20-208ENST00000578985 SLC15A5A6NIM6 579 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 CALM1P0DP23 149 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 CALM2P0DP24 149 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 CALM3P0DP25 149 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 FLT3LGP49771 235 aa17.93■□□□□ 0.46
IFT20-208ENST00000578985 ADGRF4Q8IZF3 695 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms