RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 PPP4R2Q9NY27 417 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 ZSWIM5Q9P217 1185 aa7.7□□□□□ -1.18
TRAF4-213ENST00000578917 HTTP42858 3142 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 PRKAR2AP13861 404 aaKnown RBP7.69□□□□□ -1.18
TRAF4-213ENST00000578917 SLC16A2P36021 539 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 CCL14Q16627 93 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 MORN1Q5T089 497 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 CCDC174Q6PII3 467 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 DGKHQ86XP1 1220 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 RIOX2Q8IUF8 465 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 U2AF1L4Q8WU68 220 aaKnown RBP7.69□□□□□ -1.18
TRAF4-213ENST00000578917 TRIB2Q92519 343 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 NBPF3Q9H094 633 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 SLC38A10Q9HBR0 1119 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 ADAMTS5Q9UNA0 930 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 TACC3Q9Y6A5 838 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 NEDD4P46934 1319 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 FRMPD2Q68DX3 1309 aaPredicted RBP7.69□□□□□ -1.18
TRAF4-213ENST00000578917 RPTORQ8N122 1335 aa7.69□□□□□ -1.18
TRAF4-213ENST00000578917 IFIT3O14879 490 aaKnown RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 CDC45O75419 566 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 SLC34A2O95436 690 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 SGPL1O95470 568 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 MYCNP04198 464 aaPredicted RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 PGK2P07205 417 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 ALAS1P13196 640 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 CYP2C19P33261 490 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 GJA8P48165 433 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 SNAP25P60880 206 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 CACNB2Q08289 660 aaPredicted RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 TRIM32Q13049 653 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 GRB14Q14449 540 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 IFIT1BQ5T764 474 aaKnown RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 RNF20Q5VTR2 975 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 ERICH6BQ5W0A0 696 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 ABRAQ8N0Z2 381 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 PNMA1Q8ND90 353 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 NCOA7Q8NI08 942 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 USP6NLQ92738 828 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 DPF3Q92784 378 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 MAP4K1Q92918 833 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.68□□□□□ -1.181e-5■■■□□ 18
TRAF4-213ENST00000578917 IL25Q9H293 177 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 FBXO40Q9UH90 709 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 ZNF214Q9UL59 606 aaPredicted RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 PRR12Q9ULL5 1215 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 RBM8AQ9Y5S9 174 aaKnown RBP7.68□□□□□ -1.18
TRAF4-213ENST00000578917 SIPA1L1O43166 1804 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 PLIN4Q96Q06 1357 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 NAV1Q8NEY1 1877 aa7.68□□□□□ -1.18
TRAF4-213ENST00000578917 CENPFP49454 3210 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
TRAF4-213ENST00000578917 FOCADQ5VW36 1801 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 E7EWF7 191 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 PLA2G6O60733 806 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 COBLO75128 1261 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CYP21A2P08686 494 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 HOXC6P09630 235 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 PARP1P09874 1014 aaKnown RBP7.67□□□□□ -1.18
TRAF4-213ENST00000578917 GOLGA8HP0CJ92 632 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CAPN2P17655 700 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 OAZ1P54368 228 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 GPATCH4Q5T3I0 446 aaKnown RBP7.67□□□□□ -1.18
TRAF4-213ENST00000578917 SYDE2Q5VT97 1194 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 TTBK2Q6IQ55 1244 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 NFXL1Q6ZNB6 911 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CHST3Q7LGC8 479 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 ENAHQ8N8S7 591 aaPredicted RBP7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CHST13Q8NET6 341 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 NPLOC4Q8TAT6 608 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 VAT1LQ9HCJ6 419 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 PNMA2Q9UL42 364 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CCPG1Q9ULG6 757 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 CNPY2Q9Y2B0 182 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 BAZ2AQ9UIF9 1905 aaKnown RBP7.67□□□□□ -1.18
TRAF4-213ENST00000578917 TNKSO95271 1327 aa7.67□□□□□ -1.18
TRAF4-213ENST00000578917 POTEB2H3BUK9 544 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 ATP2A1O14983 1001 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 FARP2O94887 1054 aaPredicted RBP7.66□□□□□ -1.18
TRAF4-213ENST00000578917 PDHBP11177 359 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 CCND3P30281 292 aaPredicted RBP7.66□□□□□ -1.18
TRAF4-213ENST00000578917 FGD1P98174 961 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 ZNF543Q08ER8 600 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 WTAPQ15007 396 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 TKFCQ3LXA3 575 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 TMEM67Q5HYA8 995 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 PRAMEF19Q5SWL8 479 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 OLFML2BQ68BL8 750 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 NSMFQ6X4W1 530 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 CYB5R4Q7L1T6 521 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 CATIPQ7Z7H3 387 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 REPS2Q8NFH8 660 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 MAML3Q96JK9 1138 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 HTATIP2Q9BUP3 242 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 UBA5Q9GZZ9 404 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 ACAD9Q9H845 621 aa7.66□□□□□ -1.18
TRAF4-213ENST00000578917 RNF146Q9NTX7 359 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms