RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 PHF24Q9UPV7 400 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 GRIN2DO15399 1336 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 VCANP13611 3396 aa5.36□□□□□ -1.55
PPP4R1-209ENST00000578329 SOWAHBA6NEL2 793 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 ATP2A1O14983 1001 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 STRNO43815 780 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 HMMRO75330 724 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 PGK1P00558 417 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 STAT3P40763 770 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 ADCYAP1R1P41586 468 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 SNAP25P60880 206 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 NKX3-2P78367 333 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 ATP2B2Q01814 1243 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 CNTN2Q02246 1040 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 TLE2Q04725 743 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 COL9A3Q14050 684 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 WDR78Q5VTH9 848 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 C1orf53Q5VUE5 145 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 MFSD14CQ5VZR4 134 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 RCSD1Q6JBY9 416 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 GIMAP6Q6P9H5 292 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 ZNF589Q86UQ0 364 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 NCAPG2Q86XI2 1143 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 TDHQ8IZJ6 230 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 LRRC47Q8N1G4 583 aaKnown RBP5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 MB21D1Q8N884 522 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 FAM133AQ8N9E0 248 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 FERMT2Q96AC1 680 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 FAM227BQ96M60 508 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 TINF2Q9BSI4 451 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 TRIM34Q9BYJ4 488 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 MROH8Q9H579 483 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 SLC38A10Q9HBR0 1119 aa5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 ARPP21Q9UBL0 812 aaPredicted RBP5.35□□□□□ -1.55
PPP4R1-209ENST00000578329 SYNRGQ9UMZ2 1314 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 A0A0D9SFI3 127 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 A0A1W2PQ45 241 aaPredicted RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 A0A1W2PQY0 241 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 MINDY4BA8MYZ0 360 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 PATL2C9JE40 543 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 IGHDP01880 384 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 CDK7P50613 346 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 RRP1P56182 461 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 CCNA1P78396 465 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 CTDSPL2Q05D32 466 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 FAAP100Q0VG06 881 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 PLS1Q14651 629 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 SLC35G1Q2M3R5 365 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 RASIP1Q5U651 963 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 TTBK2Q6IQ55 1244 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 GPR153Q6NV75 609 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 DPP9Q86TI2 863 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 DEFB123Q8N688 67 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 GMCL1P1Q8NEA9 526 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 BADQ92934 168 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 CHMP4CQ96CF2 233 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 AGBL1Q96MI9 1066 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 UBE2OQ9C0C9 1292 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 UPF3AQ9H1J1 476 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 ARHGEF10LQ9HCE6 1279 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 RAVER2Q9HCJ3 691 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 CLIP2Q9UDT6 1046 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 TBX21Q9UL17 535 aa5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 DIS3Q9Y2L1 958 aaKnown RBP5.34□□□□□ -1.55
PPP4R1-209ENST00000578329 TRANK1O15050 2925 aa5.34□□□□□ -1.56
PPP4R1-209ENST00000578329 UMODL1Q5DID0 1318 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 TTC41PQ6P2S7 1318 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 KIAA0355O15063 1070 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 MS4A1P11836 297 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 FCER1AP12319 257 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 CNGA1P29973 690 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 PDE1AP54750 535 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 PPARAQ07869 468 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SNRNP48Q6IEG0 339 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 TAPT1Q6NXT6 567 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SAMD1Q6SPF0 538 aaPredicted RBP5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 ANKRD33Q7Z3H0 272 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 TBC1D10CQ8IV04 446 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SMC5Q8IY18 1101 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SLC43A3Q8NBI5 491 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 CTAGE1Q96RT6 745 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 MMP19Q99542 508 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SLF1Q9BQI6 1058 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 TEX13BQ9BXU2 312 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 PDGFCQ9NRA1 345 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 ANAPC4Q9UJX5 808 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 GNEQ9Y223 722 aaKnown RBP5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 ATP11BQ9Y2G3 1177 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 STXBP5LQ9Y2K9 1186 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 TAF6LQ9Y6J9 622 aa5.33□□□□□ -1.56
PPP4R1-209ENST00000578329 SYNGAP1Q96PV0 1343 aa5.32□□□□□ -1.56
PPP4R1-209ENST00000578329 ORC4O43929 436 aa5.32□□□□□ -1.56
PPP4R1-209ENST00000578329 MSCO60682 206 aa5.32□□□□□ -1.56
PPP4R1-209ENST00000578329 GLRX3O76003 335 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms