RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 CTDP1Q9Y5B0 961 aaPredicted RBP17.25■□□□□ 0.35
ITGB4-204ENST00000578318 DNAH12Q6ZR08 3092 aa17.25■□□□□ 0.35
ITGB4-204ENST00000578318 ZBED4O75132 1171 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 PRDM1O75626 825 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 ZNF865P0CJ78 1059 aaPredicted RBP17.24■□□□□ 0.35
ITGB4-204ENST00000578318 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 FERMT2Q96AC1 680 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 CEP95Q96GE4 821 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 MTMR4Q9NYA4 1195 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 COL6A3P12111 3177 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 PLIN4Q96Q06 1357 aa17.24■□□□□ 0.35
ITGB4-204ENST00000578318 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 TTLL1O95922 423 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 PGK1P00558 417 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
ITGB4-204ENST00000578318 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
ITGB4-204ENST00000578318 PDE4BQ07343 736 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
ITGB4-204ENST00000578318 GMCL1P1Q8NEA9 526 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 FSD1Q9BTV5 496 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 FEM1BQ9UK73 627 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
ITGB4-204ENST00000578318 DNAJC25-GNG10A0A024R161 153 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 TSPY3P0CV98 308 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 TSPY8P0CW00 308 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 MAMDC4Q6UXC1 1216 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.22■□□□□ 0.35
ITGB4-204ENST00000578318 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 LRRC47Q8N1G4 583 aaKnown RBP17.22■□□□□ 0.35
ITGB4-204ENST00000578318 NEDD1Q8NHV4 660 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
ITGB4-204ENST00000578318 NAPBQ9H115 298 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 SLC38A10Q9HBR0 1119 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 PCDHB15Q9Y5E8 787 aa17.22■□□□□ 0.35
ITGB4-204ENST00000578318 ADAMTS4O75173 837 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 MX1P20591 662 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 SLC4A3P48751 1232 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 OAZ1P54368 228 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 TLE2Q04725 743 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 PPARAQ07869 468 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 ZMYM1Q5SVZ6 1142 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 ZNF467Q7Z7K2 595 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-204ENST00000578318 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
ITGB4-204ENST00000578318 BADQ92934 168 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
ITGB4-204ENST00000578318 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
ITGB4-204ENST00000578318 MCM3APO60318 1980 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 A0A1W2PQ45 241 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-204ENST00000578318 A0A1W2PQY0 241 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 POTEB2H3BUK9 544 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-204ENST00000578318 FDX1P10109 184 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 BMP3P12645 472 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 SH3RF1Q7Z6J0 888 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 CHST13Q8NET6 341 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 LENG1Q96BZ8 264 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-204ENST00000578318 TSEN34Q9BSV6 310 aaKnown RBP17.2■□□□□ 0.34
ITGB4-204ENST00000578318 ZHX1Q9UKY1 873 aaPredicted RBP17.2■□□□□ 0.34
ITGB4-204ENST00000578318 TACC3Q9Y6A5 838 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
ITGB4-204ENST00000578318 TRIM43BA6NCK2 446 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 CLTBP09497 229 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 TFAP4Q01664 338 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 SHHQ15465 462 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 ANKRD35Q8N283 1001 aa17.19■□□□□ 0.34
ITGB4-204ENST00000578318 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
ITGB4-204ENST00000578318 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 DLL1O00548 723 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 C9orf50Q5SZB4 431 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 ZNF697Q5TEC3 545 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 STARD7Q9NQZ5 370 aa17.18■□□□□ 0.34
ITGB4-204ENST00000578318 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-204ENST00000578318 ZBTB47Q9UFB7 747 aaPredicted RBP17.18■□□□□ 0.34
ITGB4-204ENST00000578318 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 KIAA0355O15063 1070 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 PQBP1O60828 265 aaKnown RBP17.17■□□□□ 0.34
ITGB4-204ENST00000578318 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
ITGB4-204ENST00000578318 STAT2P52630 851 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 ACLYP53396 1101 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 FAM160B2Q86V87 743 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 GMCL1Q96IK5 515 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 FGD4Q96M96 766 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 ABHD16BQ9H3Z7 469 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
ITGB4-204ENST00000578318 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
ITGB4-204ENST00000578318 SLC1A4P43007 532 aa17.16■□□□□ 0.34
ITGB4-204ENST00000578318 ARMCX2Q7L311 632 aa17.16■□□□□ 0.34
ITGB4-204ENST00000578318 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
ITGB4-204ENST00000578318 TOX2Q96NM4 488 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms