RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 VWCEQ96DN2 955 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 MAGEB10Q96LZ2 347 aaPredicted RBP6.33□□□□□ -1.4
KRT39-202ENST00000578029 FBXL18Q96ME1 805 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 ASPNQ9BXN1 380 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
KRT39-202ENST00000578029 MYH16Q9H6N6 1097 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 RIPOR2Q9Y4F9 1068 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 ACTL7BQ9Y614 415 aa6.33□□□□□ -1.4
KRT39-202ENST00000578029 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 KIF3BO15066 747 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 KATNA1O75449 491 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 TIAF1O95411 115 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 CPP00450 1065 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 KCNJ6P48051 423 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 GFRA1P56159 465 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 ZNF445P59923 1031 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 GRB10Q13322 594 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 PPP2R5AQ15172 486 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 PCBP1Q15365 356 aaKnown RBP eCLIP6.32□□□□□ -1.4
KRT39-202ENST00000578029 ANKRD34AQ69YU3 496 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 FGD2Q7Z6J4 655 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 WDR75Q8IWA0 830 aaKnown RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 RAVER1Q8IY67 606 aaKnown RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 FAM9AQ8IZU1 332 aaPredicted RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 SYTL5Q8TDW5 730 aaPredicted RBP6.32□□□□□ -1.4
KRT39-202ENST00000578029 SLC16A10Q8TF71 515 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 NKX2-4Q9H2Z4 354 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 PRR13Q9NZ81 148 aa6.32□□□□□ -1.4
KRT39-202ENST00000578029 ERBB4Q15303 1308 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 GPR39O43194 453 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 TSPAN6O43657 245 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 KPNA6O60684 536 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 SNRPB2P08579 225 aaKnown RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 JMJD7P0C870 316 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 NAT1P18440 290 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 MCL1Q07820 350 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 ITKQ08881 620 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 PPP2R5DQ14738 602 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 STAT4Q14765 748 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 NBPF9Q3BBW0 867 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 CFAP100Q494V2 611 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 LETMD1Q6P1Q0 360 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 IGF2-ASQ6U949 168 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 C2CD4AQ8NCU7 369 aaPredicted RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 BRF1Q92994 677 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 USP7Q93009 1102 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 TSR2Q969E8 191 aaKnown RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 TTC1Q99614 292 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 MIPEPQ99797 713 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 MTFR1LQ9H019 292 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 NOL6Q9H6R4 1146 aaKnown RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 CYP26B1Q9NR63 512 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
KRT39-202ENST00000578029 SF3B6Q9Y3B4 125 aaKnown RBP6.31□□□□□ -1.4
KRT39-202ENST00000578029 COL17A1Q9UMD9 1497 aaPredicted RBP6.3□□□□□ -1.4
KRT39-202ENST00000578029 BLACEA4D250 179 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 AQP7O14520 342 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 PEX14O75381 377 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 WFS1O76024 890 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 SCG5P05408 212 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 DGKGP49619 791 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 NEK2P51955 445 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 AMPD2Q01433 879 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 KRT76Q01546 638 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 ZNF460Q14592 562 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
KRT39-202ENST00000578029 NTRK3Q16288 839 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 GORABQ5T7V8 394 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 SPATS2Q86XZ4 545 aaKnown RBP6.3□□□□□ -1.4
KRT39-202ENST00000578029 FIBCD1Q8N539 461 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 TMEM145Q8NBT3 493 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 OR2W6PQ8NHA6 318 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 SCLYQ96I15 445 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
KRT39-202ENST00000578029 IFT22Q9H7X7 185 aa6.3□□□□□ -1.4
KRT39-202ENST00000578029 LOC102724159A0A0B4J2E5 919 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 TCRBV16S1A1N1A0A5B0 115 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 KRBA1A5PL33 1030 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 ZEB2O60315 1214 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 SLURP2P0DP57 97 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 ITIH2P19823 946 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 CYP7A1P22680 504 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 SCNN1BP51168 640 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 MTMR1Q13613 665 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 PWP2Q15269 919 aaKnown RBP6.29□□□□□ -1.4
KRT39-202ENST00000578029 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
KRT39-202ENST00000578029 CCSAPQ6IQ19 270 aaPredicted RBP6.29□□□□□ -1.4
KRT39-202ENST00000578029 USP53Q70EK8 1073 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 ANKLE2Q86XL3 938 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 DCAF4Q8WV16 495 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 MTMR8Q96EF0 704 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 WNK4Q96J92 1243 aa6.29□□□□□ -1.4
KRT39-202ENST00000578029 E2F8A0AVK6 867 aa6.28□□□□□ -1.4
KRT39-202ENST00000578029 SHTN1A0MZ66 631 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms