RNA–Protein interactions for RNA: ENST00000577699.6

AP003028.1-201, humanhuman

TSL 5 BASIC

Gene AP003028.1, Length 1,033 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003028.1-201ENST00000577699 SMCHD1A6NHR9 2005 aa13.51□□□□□ -0.25
AP003028.1-201ENST00000577699 SYNGAP1Q96PV0 1343 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 F5H6K3 240 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 ATP2A1O14983 1001 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 GPAA1O43292 621 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 PGK1P00558 417 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 ZNF865P0CJ78 1059 aaPredicted RBP13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 TAL1P17542 331 aaPredicted RBP13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 TDO2P48775 406 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 TLE2Q04725 743 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 KLRC3Q07444 240 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 LRRFIP1Q32MZ4 808 aaKnown RBP13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 ZNF697Q5TEC3 545 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 BADQ92934 168 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 GUCD1Q96NT3 240 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 DCTPP1Q9H773 170 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 SYNPO2Q9UMS6 1093 aa13.5□□□□□ -0.25
AP003028.1-201ENST00000577699 PLIN4Q96Q06 1357 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 A0A1W2PQ45 241 aaPredicted RBP13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 A0A1W2PQY0 241 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 TRIM43BA6NCK2 446 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 CLTBP09497 229 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 SHHQ15465 462 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 C9orf50Q5SZB4 431 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 POTEHQ6S545 545 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 STK11IPQ8N1F8 1099 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 TRIM43Q96BQ3 446 aaPredicted RBP13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 LENG1Q96BZ8 264 aaPredicted RBP13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 EYSQ5T1H1 3165 aa13.49□□□□□ -0.25
AP003028.1-201ENST00000577699 CDH23Q9H251 3354 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 SYNRGQ9UMZ2 1314 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 DNAJC25-GNG10A0A024R161 153 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 M0R2C6 588 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 ZBED4O75132 1171 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 ADAMTS4O75173 837 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 APPP05067 770 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 MAMDC4Q6UXC1 1216 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 ZNF444Q8N0Y2 327 aaPredicted RBP13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 GMCL1P1Q8NEA9 526 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 DDX11Q96FC9 970 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 CEP95Q96GE4 821 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 TSEN34Q9BSV6 310 aaKnown RBP13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 CLIP2Q9UDT6 1046 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 RIPK3Q9Y572 518 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 CTDP1Q9Y5B0 961 aaPredicted RBP13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
AP003028.1-201ENST00000577699 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 KIAA0355O15063 1070 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 PQBP1O60828 265 aaKnown RBP13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 PRDM1O75626 825 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 TTLL1O95922 423 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 ACLYP53396 1101 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 OAZ1P54368 228 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 CPXCR1Q8N123 301 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 MKL1Q969V6 931 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 FBXO40Q9UH90 709 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 FEM1BQ9UK73 627 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 FAM184BQ9ULE4 1060 aa13.47□□□□□ -0.25
AP003028.1-201ENST00000577699 MOXD2PA6NHM9 499 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 ERC2O15083 957 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 SNAI1O95863 264 aaPredicted RBP13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 PDE4BQ07343 736 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 ANKRD33Q7Z3H0 272 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 IFNL3Q8IZI9 196 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 LRRC47Q8N1G4 583 aaKnown RBP13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 TOX2Q96NM4 488 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 STARD7Q9NQZ5 370 aa13.46□□□□□ -0.25
AP003028.1-201ENST00000577699 MCM3APO60318 1980 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 DUSP11O75319 330 aaKnown RBP13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 RAG1P15918 1043 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 ITGB8P26012 769 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 CST5P28325 142 aaPredicted RBP13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 FPGSQ05932 587 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 CHST13Q8NET6 341 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 NEDD1Q8NHV4 660 aa13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
AP003028.1-201ENST00000577699 FSD1Q9BTV5 496 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms