RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 KIF2CQ99661 725 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
RPAIN-217ENST00000575711 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-217ENST00000575711 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-217ENST00000575711 SLC16A2P36021 539 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-217ENST00000575711 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
RPAIN-217ENST00000575711 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 PAGR1Q9BTK6 254 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 ALDH8A1Q9H2A2 487 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-217ENST00000575711 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 RABGAP1Q9Y3P9 1069 aa16.3■□□□□ 0.2
RPAIN-217ENST00000575711 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
RPAIN-217ENST00000575711 GOLGA8BA8MQT2 603 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 GPR25O00155 361 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 VWA5AO00534 786 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 FOXN1O15353 648 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 ZBED4O75132 1171 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 FDX1P10109 184 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 BCRP11274 1271 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 RXRAP19793 462 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 CTCFP49711 727 aaPredicted RBP16.29■□□□□ 0.2
RPAIN-217ENST00000575711 GNAQP50148 359 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 RCAN1P53805 252 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 RABEP1Q15276 862 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 FAM110CQ1W6H9 321 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 GPRC5AQ8NFJ5 357 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 RBPJLQ9UBG7 517 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 MORF4L1Q9UBU8 362 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
RPAIN-217ENST00000575711 GOLGA8AA7E2F4 631 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 DHX16O60231 1041 aaKnown RBP16.28■□□□□ 0.2
RPAIN-217ENST00000575711 HSPA8P11142 646 aaKnown RBP16.28■□□□□ 0.2
RPAIN-217ENST00000575711 EVCP57679 992 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 SP3Q02447 781 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 RTN1Q16799 776 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 CCDC144CPQ8IYA2 1237 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 FANCBQ8NB91 859 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 UBA5Q9GZZ9 404 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 SLC38A10Q9HBR0 1119 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 TXNRD2Q9NNW7 524 aa16.28■□□□□ 0.2
RPAIN-217ENST00000575711 RBM28Q9NW13 759 aaKnown RBP16.28■□□□□ 0.2
RPAIN-217ENST00000575711 PCNTO95613 3336 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 FKTNO75072 461 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 CNMDO75829 334 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPAIN-217ENST00000575711 AK2P54819 239 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 ERVK-9P63128 1117 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 ERVK-24P63145 666 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 CCNA1P78396 465 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 CPVLQ9H3G5 476 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 BTBD7Q9P203 1132 aa16.27■□□□□ 0.2
RPAIN-217ENST00000575711 CCDC196A0A1B0GTZ2 297 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 PEX10O60683 326 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 OAZ1P54368 228 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 PLS1Q14651 629 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 KIF22Q14807 665 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 PPP2R5BQ15173 497 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 ZNF296Q8WUU4 475 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-217ENST00000575711 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
RPAIN-217ENST00000575711 LARP6Q9BRS8 491 aaKnown RBP16.26■□□□□ 0.19
RPAIN-217ENST00000575711 SPATC1LQ9H0A9 340 aa16.26■□□□□ 0.19
RPAIN-217ENST00000575711 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
RPAIN-217ENST00000575711 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 ST18O60284 1047 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
RPAIN-217ENST00000575711 LBX1P52954 281 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 SNAP25P60880 206 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 Q3C1V9 767 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 TMTC3Q6ZXV5 915 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 NOL8Q76FK4 1167 aaKnown RBP16.25■□□□□ 0.19
RPAIN-217ENST00000575711 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
RPAIN-217ENST00000575711 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
RPAIN-217ENST00000575711 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 ZNF214Q9UL59 606 aaPredicted RBP16.25■□□□□ 0.19
RPAIN-217ENST00000575711 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 RLFQ13129 1914 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 NID2Q14112 1375 aa16.25■□□□□ 0.19
RPAIN-217ENST00000575711 PARP14Q460N5 1801 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 PLEKHA8P1O95397 391 aa16.24■□□□□ 0.19
RPAIN-217ENST00000575711 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms